Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04405
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
1,016,530 | + | +1.3 | |||
1,016,867 | + | +1.2 | |||
1,016,920 | + | +0.7 | |||
1,017,174 | - | +3.6 | |||
1,017,244 | - | +1.5 | |||
1,017,257 | + | +1.3 | |||
1,017,257 | + | +0.5 | |||
1,017,258 | - | -0.2 | |||
1,017,258 | - | +2.9 | |||
1,017,458 | - | +0.3 | |||
1,017,472 | - | +1.4 | |||
1,017,472 | - | -0.7 | |||
1,017,594 | + | BPHYT_RS04405 | 0.17 | -0.0 | |
1,017,679 | - | BPHYT_RS04405 | 0.24 | +0.1 | |
1,017,720 | + | BPHYT_RS04405 | 0.28 | +2.2 | |
1,017,961 | + | BPHYT_RS04405 | 0.49 | -0.0 | |
1,018,004 | - | BPHYT_RS04405 | 0.52 | +1.3 | |
1,018,185 | + | BPHYT_RS04405 | 0.68 | +0.2 | |
1,018,436 | + | -0.0 | |||
1,018,452 | + | +1.0 | |||
1,018,554 | + | +0.0 |
Or see this region's nucleotide sequence