Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03975 and BPHYT_RS03980 are separated by 87 nucleotides BPHYT_RS03980 and BPHYT_RS03985 are separated by 53 nucleotides
BPHYT_RS03975: BPHYT_RS03975 - AraC family transcriptional regulator, at 903,658 to 904,641
_RS03975
BPHYT_RS03980: BPHYT_RS03980 - mannose-1-phosphate guanyltransferase, at 904,729 to 906,276
_RS03980
BPHYT_RS03985: BPHYT_RS03985 - undecaprenyl-phosphate glucose phosphotransferase, at 906,330 to 907,715
_RS03985
Position (kb) 904
905
906
907 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 903.835 kb on + strand, within BPHYT_RS03975 at 903.925 kb on + strand, within BPHYT_RS03975 at 903.947 kb on - strand, within BPHYT_RS03975 at 904.078 kb on + strand, within BPHYT_RS03975 at 904.079 kb on - strand, within BPHYT_RS03975 at 904.079 kb on - strand, within BPHYT_RS03975 at 904.444 kb on - strand, within BPHYT_RS03975 at 905.386 kb on + strand, within BPHYT_RS03980 at 905.386 kb on + strand, within BPHYT_RS03980 at 905.387 kb on - strand, within BPHYT_RS03980 at 905.387 kb on - strand, within BPHYT_RS03980 at 905.512 kb on + strand, within BPHYT_RS03980 at 905.512 kb on + strand, within BPHYT_RS03980 at 905.567 kb on - strand, within BPHYT_RS03980 at 906.259 kb on + strand at 906.259 kb on + strand at 906.504 kb on + strand, within BPHYT_RS03985 at 906.551 kb on - strand, within BPHYT_RS03985 at 906.780 kb on - strand, within BPHYT_RS03985 at 906.909 kb on + strand, within BPHYT_RS03985 at 906.909 kb on + strand, within BPHYT_RS03985 at 906.910 kb on - strand, within BPHYT_RS03985 at 906.911 kb on + strand, within BPHYT_RS03985 at 906.912 kb on - strand, within BPHYT_RS03985 at 906.912 kb on - strand, within BPHYT_RS03985
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 903,835 + BPHYT_RS03975 0.18 -0.9 903,925 + BPHYT_RS03975 0.27 -0.5 903,947 - BPHYT_RS03975 0.29 +0.0 904,078 + BPHYT_RS03975 0.43 +4.1 904,079 - BPHYT_RS03975 0.43 +2.2 904,079 - BPHYT_RS03975 0.43 +1.6 904,444 - BPHYT_RS03975 0.80 +1.5 905,386 + BPHYT_RS03980 0.42 +1.7 905,386 + BPHYT_RS03980 0.42 +0.9 905,387 - BPHYT_RS03980 0.43 +1.7 905,387 - BPHYT_RS03980 0.43 +1.1 905,512 + BPHYT_RS03980 0.51 +1.4 905,512 + BPHYT_RS03980 0.51 +2.6 905,567 - BPHYT_RS03980 0.54 +1.6 906,259 + -0.7 906,259 + -0.4 906,504 + BPHYT_RS03985 0.13 +1.1 906,551 - BPHYT_RS03985 0.16 +1.3 906,780 - BPHYT_RS03985 0.32 +0.2 906,909 + BPHYT_RS03985 0.42 +0.6 906,909 + BPHYT_RS03985 0.42 +0.1 906,910 - BPHYT_RS03985 0.42 +0.4 906,911 + BPHYT_RS03985 0.42 +0.4 906,912 - BPHYT_RS03985 0.42 +0.8 906,912 - BPHYT_RS03985 0.42 -0.4
Or see this region's nucleotide sequence