Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03565 and BPHYT_RS03570 are separated by 330 nucleotides BPHYT_RS03570 and BPHYT_RS03575 are separated by 185 nucleotides
BPHYT_RS03565: BPHYT_RS03565 - NAD kinase, at 809,324 to 810,226
_RS03565
BPHYT_RS03570: BPHYT_RS03570 - heat-inducible transcription repressor HrcA, at 810,557 to 811,576
_RS03570
BPHYT_RS03575: BPHYT_RS03575 - ferrochelatase, at 811,762 to 812,832
_RS03575
Position (kb) 810
811
812 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 810.236 kb on - strand at 810.236 kb on - strand at 810.242 kb on + strand at 810.242 kb on + strand at 810.243 kb on - strand at 810.243 kb on - strand at 810.243 kb on - strand at 810.243 kb on - strand at 810.243 kb on - strand at 810.243 kb on - strand at 810.246 kb on + strand at 810.247 kb on - strand at 810.325 kb on + strand at 810.514 kb on + strand at 810.561 kb on + strand at 810.562 kb on - strand at 810.605 kb on + strand at 810.844 kb on + strand, within BPHYT_RS03570 at 810.844 kb on + strand, within BPHYT_RS03570 at 810.845 kb on - strand, within BPHYT_RS03570 at 810.845 kb on - strand, within BPHYT_RS03570 at 810.845 kb on - strand, within BPHYT_RS03570 at 811.003 kb on + strand, within BPHYT_RS03570 at 811.004 kb on - strand, within BPHYT_RS03570 at 811.091 kb on + strand, within BPHYT_RS03570 at 811.091 kb on + strand, within BPHYT_RS03570 at 811.091 kb on + strand, within BPHYT_RS03570 at 811.092 kb on - strand, within BPHYT_RS03570 at 811.414 kb on - strand, within BPHYT_RS03570 at 811.509 kb on - strand at 811.708 kb on + strand at 811.709 kb on - strand at 811.710 kb on + strand at 811.710 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 810,236 - +2.2 810,236 - +0.2 810,242 + +1.6 810,242 + +3.2 810,243 - -0.9 810,243 - +0.9 810,243 - +0.3 810,243 - -0.3 810,243 - -1.0 810,243 - +0.5 810,246 + +1.3 810,247 - +0.6 810,325 + +0.0 810,514 + -1.1 810,561 + -0.8 810,562 - +0.5 810,605 + -3.4 810,844 + BPHYT_RS03570 0.28 -0.2 810,844 + BPHYT_RS03570 0.28 -3.2 810,845 - BPHYT_RS03570 0.28 -1.2 810,845 - BPHYT_RS03570 0.28 -2.4 810,845 - BPHYT_RS03570 0.28 -0.9 811,003 + BPHYT_RS03570 0.44 +0.4 811,004 - BPHYT_RS03570 0.44 -0.9 811,091 + BPHYT_RS03570 0.52 +1.5 811,091 + BPHYT_RS03570 0.52 -1.8 811,091 + BPHYT_RS03570 0.52 +1.5 811,092 - BPHYT_RS03570 0.52 -3.1 811,414 - BPHYT_RS03570 0.84 -1.3 811,509 - -1.1 811,708 + +1.0 811,709 - -0.0 811,710 + -0.1 811,710 + +1.7
Or see this region's nucleotide sequence