Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03500 and BPHYT_RS03505 are separated by 8 nucleotides BPHYT_RS03505 and BPHYT_RS03510 are separated by 149 nucleotides
BPHYT_RS03500: BPHYT_RS03500 - glycolate oxidase, at 788,936 to 790,162
_RS03500
BPHYT_RS03505: BPHYT_RS03505 - FAD-binding protein, at 790,171 to 791,259
_RS03505
BPHYT_RS03510: BPHYT_RS03510 - FAD-binding protein, at 791,409 to 792,902
_RS03510
Position (kb) 790
791
792 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.394 kb on - strand, within BPHYT_RS03500 at 789.459 kb on + strand, within BPHYT_RS03500 at 789.513 kb on + strand, within BPHYT_RS03500 at 789.591 kb on - strand, within BPHYT_RS03500 at 789.891 kb on + strand, within BPHYT_RS03500 at 790.006 kb on - strand, within BPHYT_RS03500 at 790.050 kb on + strand at 790.975 kb on - strand, within BPHYT_RS03505 at 790.975 kb on - strand, within BPHYT_RS03505 at 791.096 kb on + strand, within BPHYT_RS03505 at 791.096 kb on + strand, within BPHYT_RS03505 at 791.097 kb on - strand, within BPHYT_RS03505 at 791.292 kb on + strand at 791.403 kb on - strand at 791.779 kb on + strand, within BPHYT_RS03510 at 791.780 kb on - strand, within BPHYT_RS03510 at 791.780 kb on - strand, within BPHYT_RS03510 at 791.822 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.854 kb on + strand, within BPHYT_RS03510 at 791.857 kb on + strand, within BPHYT_RS03510 at 791.858 kb on - strand, within BPHYT_RS03510 at 791.871 kb on - strand, within BPHYT_RS03510 at 792.033 kb on + strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510 at 792.034 kb on - strand, within BPHYT_RS03510
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 789,256 + BPHYT_RS03500 0.26 +1.4 789,256 + BPHYT_RS03500 0.26 +0.5 789,256 + BPHYT_RS03500 0.26 -0.6 789,394 - BPHYT_RS03500 0.37 +0.1 789,459 + BPHYT_RS03500 0.43 +1.1 789,513 + BPHYT_RS03500 0.47 -0.3 789,591 - BPHYT_RS03500 0.53 +1.1 789,891 + BPHYT_RS03500 0.78 +0.2 790,006 - BPHYT_RS03500 0.87 +0.4 790,050 + +0.1 790,975 - BPHYT_RS03505 0.74 +0.2 790,975 - BPHYT_RS03505 0.74 +1.0 791,096 + BPHYT_RS03505 0.85 +1.5 791,096 + BPHYT_RS03505 0.85 +0.7 791,097 - BPHYT_RS03505 0.85 +0.4 791,292 + +3.5 791,403 - -0.0 791,779 + BPHYT_RS03510 0.25 +0.9 791,780 - BPHYT_RS03510 0.25 -0.0 791,780 - BPHYT_RS03510 0.25 +0.1 791,822 + BPHYT_RS03510 0.28 +0.7 791,854 + BPHYT_RS03510 0.30 -1.9 791,854 + BPHYT_RS03510 0.30 +0.7 791,854 + BPHYT_RS03510 0.30 +1.1 791,857 + BPHYT_RS03510 0.30 +0.8 791,858 - BPHYT_RS03510 0.30 -0.5 791,871 - BPHYT_RS03510 0.31 +0.6 792,033 + BPHYT_RS03510 0.42 -0.7 792,034 - BPHYT_RS03510 0.42 +0.2 792,034 - BPHYT_RS03510 0.42 +0.1 792,034 - BPHYT_RS03510 0.42 +1.2
Or see this region's nucleotide sequence