Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03105 and BPHYT_RS03110 are separated by 31 nucleotides BPHYT_RS03110 and BPHYT_RS03115 are separated by 125 nucleotides
BPHYT_RS03105: BPHYT_RS03105 - DSBA oxidoreductase, at 694,600 to 696,195
_RS03105
BPHYT_RS03110: BPHYT_RS03110 - MarR family transcriptional regulator, at 696,227 to 696,736
_RS03110
BPHYT_RS03115: BPHYT_RS03115 - amino acid deaminase, at 696,862 to 698,139
_RS03115
Position (kb) 696
697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 695.491 kb on + strand, within BPHYT_RS03105 at 695.491 kb on + strand at 695.491 kb on + strand, within BPHYT_RS03105 at 695.637 kb on + strand, within BPHYT_RS03105 at 695.638 kb on + strand, within BPHYT_RS03105 at 695.638 kb on + strand, within BPHYT_RS03105 at 695.638 kb on + strand, within BPHYT_RS03105 at 695.638 kb on + strand, within BPHYT_RS03105 at 695.639 kb on - strand, within BPHYT_RS03105 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.893 kb on - strand, within BPHYT_RS03105 at 695.893 kb on - strand, within BPHYT_RS03105 at 695.896 kb on + strand, within BPHYT_RS03105 at 695.896 kb on + strand, within BPHYT_RS03105 at 695.897 kb on - strand, within BPHYT_RS03105 at 695.997 kb on + strand, within BPHYT_RS03105 at 696.529 kb on + strand at 696.530 kb on - strand, within BPHYT_RS03110 at 696.530 kb on - strand, within BPHYT_RS03110 at 696.897 kb on - strand at 697.013 kb on + strand, within BPHYT_RS03115 at 697.014 kb on - strand, within BPHYT_RS03115 at 697.014 kb on - strand, within BPHYT_RS03115 at 697.095 kb on - strand, within BPHYT_RS03115 at 697.148 kb on - strand, within BPHYT_RS03115 at 697.148 kb on - strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.280 kb on + strand, within BPHYT_RS03115 at 697.304 kb on + strand, within BPHYT_RS03115 at 697.331 kb on - strand, within BPHYT_RS03115 at 697.331 kb on - strand, within BPHYT_RS03115 at 697.379 kb on + strand, within BPHYT_RS03115 at 697.379 kb on + strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 695,491 + BPHYT_RS03105 0.56 -0.0 695,491 + +4.6 695,491 + BPHYT_RS03105 0.56 +0.4 695,637 + BPHYT_RS03105 0.65 +3.2 695,638 + BPHYT_RS03105 0.65 +1.0 695,638 + BPHYT_RS03105 0.65 +0.1 695,638 + BPHYT_RS03105 0.65 +1.3 695,638 + BPHYT_RS03105 0.65 +0.0 695,639 - BPHYT_RS03105 0.65 +0.0 695,892 + BPHYT_RS03105 0.81 +0.9 695,892 + BPHYT_RS03105 0.81 +0.0 695,892 + BPHYT_RS03105 0.81 +0.1 695,893 - BPHYT_RS03105 0.81 -3.1 695,893 - BPHYT_RS03105 0.81 +0.1 695,896 + BPHYT_RS03105 0.81 -0.5 695,896 + BPHYT_RS03105 0.81 -0.1 695,897 - BPHYT_RS03105 0.81 +2.6 695,997 + BPHYT_RS03105 0.88 +0.7 696,529 + -0.0 696,530 - BPHYT_RS03110 0.59 -1.2 696,530 - BPHYT_RS03110 0.59 -2.1 696,897 - -0.7 697,013 + BPHYT_RS03115 0.12 -1.0 697,014 - BPHYT_RS03115 0.12 +1.2 697,014 - BPHYT_RS03115 0.12 +0.7 697,095 - BPHYT_RS03115 0.18 -0.3 697,148 - BPHYT_RS03115 0.22 -1.7 697,148 - BPHYT_RS03115 0.22 -2.2 697,190 + BPHYT_RS03115 0.26 +1.8 697,190 + BPHYT_RS03115 0.26 +0.8 697,190 + BPHYT_RS03115 0.26 -1.6 697,191 - BPHYT_RS03115 0.26 +0.1 697,191 - BPHYT_RS03115 0.26 -0.4 697,191 - BPHYT_RS03115 0.26 -1.4 697,280 + BPHYT_RS03115 0.33 -0.4 697,304 + BPHYT_RS03115 0.35 -0.0 697,331 - BPHYT_RS03115 0.37 -0.0 697,331 - BPHYT_RS03115 0.37 +0.5 697,379 + BPHYT_RS03115 0.40 -0.3 697,379 + BPHYT_RS03115 0.40 -0.5 697,515 - BPHYT_RS03115 0.51 +1.4 697,515 - BPHYT_RS03115 0.51 -0.0 697,515 - BPHYT_RS03115 0.51 +1.3
Or see this region's nucleotide sequence