Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02890 and BPHYT_RS02895 are separated by 127 nucleotides BPHYT_RS02895 and BPHYT_RS02900 are separated by 337 nucleotides BPHYT_RS02900 and BPHYT_RS02905 are separated by 170 nucleotides
BPHYT_RS02890: BPHYT_RS02890 - HPr kinase/phosphorylase, at 643,976 to 644,944
_RS02890
BPHYT_RS02895: BPHYT_RS02895 - PTS sugar transporter subunit IIA, at 645,072 to 645,527
_RS02895
BPHYT_RS02900: BPHYT_RS02900 - ribosome hibernation promoting factor, at 645,865 to 646,221
_RS02900
BPHYT_RS02905: BPHYT_RS02905 - RNA polymerase subunit sigma-54, at 646,392 to 647,903
_RS02905
Position (kb) 645
646
647 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 645.026 kb on - strand at 645.663 kb on + strand at 645.691 kb on + strand at 645.691 kb on + strand at 645.692 kb on - strand at 645.692 kb on - strand at 645.692 kb on - strand at 645.692 kb on - strand at 645.693 kb on + strand at 645.693 kb on + strand at 645.693 kb on + strand at 645.694 kb on - strand at 645.694 kb on - strand at 645.736 kb on + strand at 645.884 kb on - strand at 645.902 kb on + strand, within BPHYT_RS02900 at 645.903 kb on - strand, within BPHYT_RS02900 at 645.996 kb on - strand, within BPHYT_RS02900 at 646.139 kb on - strand, within BPHYT_RS02900 at 646.186 kb on + strand at 646.221 kb on + strand at 646.221 kb on + strand at 646.237 kb on + strand at 646.237 kb on + strand at 646.238 kb on - strand at 646.238 kb on - strand at 646.265 kb on + strand at 646.266 kb on - strand at 646.266 kb on - strand at 646.266 kb on - strand at 646.365 kb on + strand at 646.393 kb on + strand at 646.394 kb on - strand at 646.442 kb on - strand at 646.455 kb on - strand at 646.540 kb on - strand at 646.553 kb on + strand, within BPHYT_RS02905 at 646.554 kb on - strand, within BPHYT_RS02905 at 646.621 kb on + strand, within BPHYT_RS02905 at 646.625 kb on + strand, within BPHYT_RS02905 at 646.626 kb on - strand, within BPHYT_RS02905 at 646.657 kb on + strand, within BPHYT_RS02905 at 646.657 kb on + strand at 646.658 kb on - strand, within BPHYT_RS02905 at 646.658 kb on - strand, within BPHYT_RS02905 at 646.658 kb on - strand, within BPHYT_RS02905 at 646.658 kb on - strand, within BPHYT_RS02905 at 646.706 kb on + strand, within BPHYT_RS02905 at 646.707 kb on - strand, within BPHYT_RS02905 at 646.707 kb on - strand, within BPHYT_RS02905 at 646.707 kb on - strand, within BPHYT_RS02905 at 646.895 kb on + strand, within BPHYT_RS02905 at 646.916 kb on - strand, within BPHYT_RS02905 at 646.916 kb on - strand, within BPHYT_RS02905 at 646.925 kb on + strand, within BPHYT_RS02905 at 646.929 kb on - strand, within BPHYT_RS02905 at 646.929 kb on - strand, within BPHYT_RS02905 at 647.011 kb on + strand, within BPHYT_RS02905 at 647.011 kb on + strand, within BPHYT_RS02905 at 647.011 kb on + strand, within BPHYT_RS02905 at 647.011 kb on + strand, within BPHYT_RS02905 at 647.011 kb on + strand, within BPHYT_RS02905 at 647.012 kb on - strand, within BPHYT_RS02905 at 647.012 kb on - strand, within BPHYT_RS02905 at 647.070 kb on + strand, within BPHYT_RS02905 at 647.070 kb on + strand, within BPHYT_RS02905 at 647.070 kb on + strand, within BPHYT_RS02905 at 647.070 kb on + strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.071 kb on - strand, within BPHYT_RS02905 at 647.172 kb on + strand, within BPHYT_RS02905 at 647.189 kb on + strand, within BPHYT_RS02905
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 645,026 - +0.3 645,663 + -1.9 645,691 + -0.9 645,691 + -2.0 645,692 - +0.2 645,692 - +0.5 645,692 - -0.3 645,692 - -0.3 645,693 + +1.5 645,693 + -0.1 645,693 + -1.4 645,694 - +0.3 645,694 - +4.4 645,736 + +1.8 645,884 - +0.9 645,902 + BPHYT_RS02900 0.10 +1.6 645,903 - BPHYT_RS02900 0.11 +0.0 645,996 - BPHYT_RS02900 0.37 -3.2 646,139 - BPHYT_RS02900 0.77 +1.2 646,186 + +0.7 646,221 + +3.4 646,221 + +1.8 646,237 + +1.1 646,237 + +2.4 646,238 - +1.1 646,238 - +2.1 646,265 + +0.8 646,266 - +1.4 646,266 - +0.9 646,266 - +0.8 646,365 + +0.4 646,393 + +1.4 646,394 - -2.2 646,442 - -1.6 646,455 - +0.4 646,540 - -0.5 646,553 + BPHYT_RS02905 0.11 +0.5 646,554 - BPHYT_RS02905 0.11 -0.5 646,621 + BPHYT_RS02905 0.15 -1.0 646,625 + BPHYT_RS02905 0.15 +0.6 646,626 - BPHYT_RS02905 0.15 +0.1 646,657 + BPHYT_RS02905 0.18 +0.5 646,657 + +1.6 646,658 - BPHYT_RS02905 0.18 +0.7 646,658 - BPHYT_RS02905 0.18 +0.4 646,658 - BPHYT_RS02905 0.18 +0.2 646,658 - BPHYT_RS02905 0.18 -0.5 646,706 + BPHYT_RS02905 0.21 +0.8 646,707 - BPHYT_RS02905 0.21 -0.1 646,707 - BPHYT_RS02905 0.21 +1.6 646,707 - BPHYT_RS02905 0.21 -1.2 646,895 + BPHYT_RS02905 0.33 -0.4 646,916 - BPHYT_RS02905 0.35 -0.2 646,916 - BPHYT_RS02905 0.35 -0.9 646,925 + BPHYT_RS02905 0.35 -1.2 646,929 - BPHYT_RS02905 0.36 +0.5 646,929 - BPHYT_RS02905 0.36 -0.6 647,011 + BPHYT_RS02905 0.41 -1.4 647,011 + BPHYT_RS02905 0.41 -0.1 647,011 + BPHYT_RS02905 0.41 -0.4 647,011 + BPHYT_RS02905 0.41 -0.4 647,011 + BPHYT_RS02905 0.41 -0.5 647,012 - BPHYT_RS02905 0.41 -0.1 647,012 - BPHYT_RS02905 0.41 +3.2 647,070 + BPHYT_RS02905 0.45 +0.0 647,070 + BPHYT_RS02905 0.45 -0.2 647,070 + BPHYT_RS02905 0.45 -0.6 647,070 + BPHYT_RS02905 0.45 -0.6 647,071 - BPHYT_RS02905 0.45 +0.3 647,071 - BPHYT_RS02905 0.45 -0.7 647,071 - BPHYT_RS02905 0.45 -0.6 647,071 - BPHYT_RS02905 0.45 -0.9 647,071 - BPHYT_RS02905 0.45 -0.0 647,071 - BPHYT_RS02905 0.45 -0.9 647,172 + BPHYT_RS02905 0.52 -1.1 647,189 + BPHYT_RS02905 0.53 -0.1
Or see this region's nucleotide sequence