Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02725 and BPHYT_RS02730 are separated by 101 nucleotides BPHYT_RS02730 and BPHYT_RS02735 overlap by 8 nucleotides
BPHYT_RS02725: BPHYT_RS02725 - GntR family transcriptional regulator, at 610,643 to 611,377
_RS02725
BPHYT_RS02730: BPHYT_RS02730 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) <small>(from data)</small>, at 611,479 to 612,582
_RS02730
BPHYT_RS02735: BPHYT_RS02735 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) <small>(from data)</small>, at 612,575 to 613,582
_RS02735
Position (kb) 611
612
613 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 610.588 kb on + strand at 610.615 kb on - strand at 610.697 kb on + strand at 610.698 kb on - strand at 611.153 kb on + strand, within BPHYT_RS02725 at 611.154 kb on - strand, within BPHYT_RS02725 at 611.159 kb on + strand, within BPHYT_RS02725 at 611.159 kb on + strand, within BPHYT_RS02725 at 611.326 kb on + strand at 611.326 kb on + strand at 611.327 kb on - strand at 611.327 kb on - strand at 611.330 kb on + strand at 611.330 kb on + strand at 611.330 kb on + strand at 611.331 kb on - strand at 611.331 kb on - strand at 611.331 kb on - strand at 611.331 kb on - strand at 611.349 kb on - strand at 611.495 kb on + strand at 611.599 kb on + strand, within BPHYT_RS02730 at 611.600 kb on - strand, within BPHYT_RS02730 at 611.845 kb on + strand, within BPHYT_RS02730 at 611.846 kb on - strand, within BPHYT_RS02730 at 611.846 kb on - strand, within BPHYT_RS02730 at 611.917 kb on + strand, within BPHYT_RS02730 at 611.918 kb on - strand, within BPHYT_RS02730 at 612.040 kb on + strand, within BPHYT_RS02730 at 612.040 kb on + strand, within BPHYT_RS02730 at 612.040 kb on + strand, within BPHYT_RS02730 at 612.040 kb on + strand, within BPHYT_RS02730 at 612.241 kb on + strand, within BPHYT_RS02730 at 612.241 kb on + strand, within BPHYT_RS02730 at 612.242 kb on - strand, within BPHYT_RS02730 at 612.242 kb on - strand, within BPHYT_RS02730 at 612.242 kb on - strand, within BPHYT_RS02730 at 612.245 kb on + strand, within BPHYT_RS02730 at 612.246 kb on - strand, within BPHYT_RS02730 at 612.426 kb on - strand, within BPHYT_RS02730 at 612.426 kb on - strand, within BPHYT_RS02730 at 612.458 kb on - strand, within BPHYT_RS02730 at 612.458 kb on - strand, within BPHYT_RS02730 at 612.574 kb on + strand at 612.574 kb on + strand at 612.575 kb on - strand at 612.581 kb on - strand at 613.013 kb on + strand, within BPHYT_RS02735 at 613.013 kb on + strand, within BPHYT_RS02735 at 613.013 kb on + strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.016 kb on - strand at 613.016 kb on - strand, within BPHYT_RS02735 at 613.112 kb on - strand, within BPHYT_RS02735 at 613.432 kb on + strand, within BPHYT_RS02735 at 613.497 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 610,588 + -0.4 610,615 - +0.3 610,697 + +0.4 610,698 - -0.2 611,153 + BPHYT_RS02725 0.69 -1.5 611,154 - BPHYT_RS02725 0.70 -1.4 611,159 + BPHYT_RS02725 0.70 -1.4 611,159 + BPHYT_RS02725 0.70 +0.6 611,326 + +0.3 611,326 + -0.2 611,327 - -0.4 611,327 - +0.6 611,330 + -1.0 611,330 + +1.9 611,330 + -2.4 611,331 - -0.4 611,331 - +0.4 611,331 - -0.5 611,331 - -2.8 611,349 - -0.9 611,495 + +0.8 611,599 + BPHYT_RS02730 0.11 +0.4 611,600 - BPHYT_RS02730 0.11 +2.3 611,845 + BPHYT_RS02730 0.33 +0.1 611,846 - BPHYT_RS02730 0.33 +1.1 611,846 - BPHYT_RS02730 0.33 +1.5 611,917 + BPHYT_RS02730 0.40 -0.1 611,918 - BPHYT_RS02730 0.40 +1.3 612,040 + BPHYT_RS02730 0.51 +1.9 612,040 + BPHYT_RS02730 0.51 -1.4 612,040 + BPHYT_RS02730 0.51 +3.2 612,040 + BPHYT_RS02730 0.51 +1.0 612,241 + BPHYT_RS02730 0.69 +0.9 612,241 + BPHYT_RS02730 0.69 -0.0 612,242 - BPHYT_RS02730 0.69 +0.4 612,242 - BPHYT_RS02730 0.69 +1.4 612,242 - BPHYT_RS02730 0.69 +2.0 612,245 + BPHYT_RS02730 0.69 +0.8 612,246 - BPHYT_RS02730 0.69 -0.0 612,426 - BPHYT_RS02730 0.86 +1.2 612,426 - BPHYT_RS02730 0.86 +0.7 612,458 - BPHYT_RS02730 0.89 +1.7 612,458 - BPHYT_RS02730 0.89 -2.3 612,574 + +1.1 612,574 + +1.2 612,575 - +1.1 612,581 - -0.2 613,013 + BPHYT_RS02735 0.43 -0.9 613,013 + BPHYT_RS02735 0.43 -2.2 613,013 + BPHYT_RS02735 0.43 +1.2 613,014 - BPHYT_RS02735 0.44 +0.0 613,014 - BPHYT_RS02735 0.44 -3.2 613,014 - BPHYT_RS02735 0.44 -2.5 613,014 - BPHYT_RS02735 0.44 -0.4 613,014 - BPHYT_RS02735 0.44 +0.1 613,014 - BPHYT_RS02735 0.44 +0.0 613,016 - +1.8 613,016 - BPHYT_RS02735 0.44 -0.7 613,112 - BPHYT_RS02735 0.53 +0.3 613,432 + BPHYT_RS02735 0.85 -3.8 613,497 - -0.1
Or see this region's nucleotide sequence