Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01990 and BPHYT_RS01995 are separated by 332 nucleotides BPHYT_RS01995 and BPHYT_RS02000 are separated by 133 nucleotides
BPHYT_RS01990: BPHYT_RS01990 - methyl-accepting chemotaxis protein, at 449,472 to 451,037
_RS01990
BPHYT_RS01995: BPHYT_RS01995 - pyrimidine permease, at 451,370 to 452,677
_RS01995
BPHYT_RS02000: BPHYT_RS02000 - sodium:proton antiporter, at 452,811 to 454,466
_RS02000
Position (kb) 451
452
453 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 450.751 kb on + strand, within BPHYT_RS01990 at 451.009 kb on + strand at 451.054 kb on - strand at 451.111 kb on - strand at 451.287 kb on - strand at 451.342 kb on + strand at 451.382 kb on + strand at 451.450 kb on - strand at 451.558 kb on + strand, within BPHYT_RS01995 at 451.616 kb on + strand, within BPHYT_RS01995 at 451.616 kb on + strand, within BPHYT_RS01995 at 451.616 kb on + strand, within BPHYT_RS01995 at 451.736 kb on + strand, within BPHYT_RS01995 at 451.736 kb on + strand, within BPHYT_RS01995 at 451.737 kb on - strand, within BPHYT_RS01995 at 451.989 kb on - strand, within BPHYT_RS01995 at 451.989 kb on - strand, within BPHYT_RS01995 at 451.989 kb on - strand, within BPHYT_RS01995 at 451.989 kb on - strand, within BPHYT_RS01995 at 451.989 kb on - strand at 451.998 kb on - strand, within BPHYT_RS01995 at 452.030 kb on - strand, within BPHYT_RS01995 at 452.167 kb on + strand, within BPHYT_RS01995 at 452.167 kb on + strand, within BPHYT_RS01995 at 452.167 kb on + strand, within BPHYT_RS01995 at 452.288 kb on + strand, within BPHYT_RS01995 at 452.289 kb on - strand, within BPHYT_RS01995 at 452.289 kb on - strand, within BPHYT_RS01995 at 452.327 kb on + strand, within BPHYT_RS01995 at 452.327 kb on + strand, within BPHYT_RS01995 at 452.328 kb on - strand, within BPHYT_RS01995 at 452.634 kb on - strand at 452.793 kb on - strand at 453.032 kb on - strand, within BPHYT_RS02000 at 453.484 kb on + strand, within BPHYT_RS02000 at 453.484 kb on + strand, within BPHYT_RS02000 at 453.512 kb on - strand, within BPHYT_RS02000
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 450,751 + BPHYT_RS01990 0.82 +0.3 451,009 + +0.5 451,054 - +0.8 451,111 - -0.4 451,287 - +0.7 451,342 + +0.3 451,382 + -1.0 451,450 - -0.2 451,558 + BPHYT_RS01995 0.14 +0.0 451,616 + BPHYT_RS01995 0.19 +1.2 451,616 + BPHYT_RS01995 0.19 +0.0 451,616 + BPHYT_RS01995 0.19 +1.5 451,736 + BPHYT_RS01995 0.28 -0.8 451,736 + BPHYT_RS01995 0.28 -0.7 451,737 - BPHYT_RS01995 0.28 +0.2 451,989 - BPHYT_RS01995 0.47 -2.0 451,989 - BPHYT_RS01995 0.47 -0.4 451,989 - BPHYT_RS01995 0.47 +1.7 451,989 - BPHYT_RS01995 0.47 -1.1 451,989 - -1.3 451,998 - BPHYT_RS01995 0.48 -1.1 452,030 - BPHYT_RS01995 0.50 -0.8 452,167 + BPHYT_RS01995 0.61 -0.8 452,167 + BPHYT_RS01995 0.61 +0.7 452,167 + BPHYT_RS01995 0.61 -0.5 452,288 + BPHYT_RS01995 0.70 +0.8 452,289 - BPHYT_RS01995 0.70 -0.0 452,289 - BPHYT_RS01995 0.70 +3.1 452,327 + BPHYT_RS01995 0.73 -0.7 452,327 + BPHYT_RS01995 0.73 -0.5 452,328 - BPHYT_RS01995 0.73 +0.3 452,634 - -0.9 452,793 - -1.0 453,032 - BPHYT_RS02000 0.13 +0.0 453,484 + BPHYT_RS02000 0.41 +0.1 453,484 + BPHYT_RS02000 0.41 +0.0 453,512 - BPHYT_RS02000 0.42 -2.4
Or see this region's nucleotide sequence