Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00745

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
170,764	+				+0.2
170,765	-				-0.1
170,925	-				+1.0
170,925	-				-0.5
170,991	+		BPHYT_RS00735	0.35	-1.2
170,992	-		BPHYT_RS00735	0.35	+0.6
170,999	+		BPHYT_RS00735	0.38	-2.2
171,000	-		BPHYT_RS00735	0.38	-0.4
171,000	-		BPHYT_RS00735	0.38	-1.1
171,299	+		BPHYT_RS00740	0.47	+0.7
171,299	+		BPHYT_RS00740	0.47	+0.7
171,300	-		BPHYT_RS00740	0.47	+1.1
171,300	-		BPHYT_RS00740	0.47	+0.5
171,529	+				+1.7
171,530	-				-1.4
171,530	-				+0.4
171,533	+				+0.3
171,533	+				-0.4
171,664	-				+0.4
172,158	-				-2.6
172,171	-				+1.0
172,171	-				+0.6
172,171	-				-0.3
172,171	-				+0.4
172,318	+		BPHYT_RS00750	0.56	-0.5
172,319	-		BPHYT_RS00750	0.57	+1.3
172,482	+				+1.0
172,504	+				+0.7
172,505	-				-1.7
172,505	-				-0.1
172,507	+				-0.4
172,508	-				-1.9
172,508	-				+3.5
172,508	-				+0.6
172,508	-				+0.9
172,695	+				-0.3
172,695	+				+1.0
172,696	-				-1.2
172,703	+				+0.3
172,754	-				-0.9
172,754	-				-0.6
172,830	+				+0.7
172,830	+				+1.0
172,830	+				+1.0
173,069	+		BPHYT_RS00755	0.12	-0.3
173,069	+		BPHYT_RS00755	0.12	+1.0
173,069	+		BPHYT_RS00755	0.12	+0.7
173,070	-		BPHYT_RS00755	0.12	-0.2
173,070	-		BPHYT_RS00755	0.12	+0.9