Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00475 and BPHYT_RS00480 are separated by 523 nucleotides BPHYT_RS00480 and BPHYT_RS00485 are separated by 57 nucleotides
BPHYT_RS00475: BPHYT_RS00475 - hypothetical protein, at 114,240 to 114,818
_RS00475
BPHYT_RS00480: BPHYT_RS00480 - excinuclease ABC subunit A, at 115,342 to 117,990
_RS00480
BPHYT_RS00485: BPHYT_RS00485 - ATPase, AAA family, at 118,048 to 119,361
_RS00485
Position (kb) 115
116
117
118 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 115.150 kb on + strand at 115.294 kb on + strand at 115.294 kb on + strand at 115.294 kb on + strand at 115.294 kb on + strand at 115.524 kb on + strand at 115.613 kb on + strand, within BPHYT_RS00480 at 115.613 kb on + strand, within BPHYT_RS00480 at 115.716 kb on - strand, within BPHYT_RS00480 at 115.745 kb on - strand, within BPHYT_RS00480 at 115.863 kb on - strand, within BPHYT_RS00480 at 115.863 kb on - strand, within BPHYT_RS00480 at 116.063 kb on + strand, within BPHYT_RS00480 at 116.063 kb on + strand, within BPHYT_RS00480 at 116.063 kb on + strand, within BPHYT_RS00480 at 116.064 kb on - strand, within BPHYT_RS00480 at 116.064 kb on - strand, within BPHYT_RS00480 at 116.625 kb on - strand, within BPHYT_RS00480 at 116.625 kb on - strand, within BPHYT_RS00480 at 116.674 kb on + strand, within BPHYT_RS00480 at 116.675 kb on - strand, within BPHYT_RS00480 at 116.675 kb on - strand, within BPHYT_RS00480 at 116.678 kb on + strand, within BPHYT_RS00480 at 116.678 kb on + strand, within BPHYT_RS00480 at 116.679 kb on - strand, within BPHYT_RS00480 at 117.230 kb on + strand, within BPHYT_RS00480 at 117.290 kb on + strand, within BPHYT_RS00480 at 117.291 kb on - strand, within BPHYT_RS00480 at 117.378 kb on - strand, within BPHYT_RS00480 at 117.500 kb on + strand, within BPHYT_RS00480 at 117.501 kb on - strand, within BPHYT_RS00480 at 117.501 kb on - strand, within BPHYT_RS00480 at 117.501 kb on - strand, within BPHYT_RS00480 at 117.569 kb on + strand, within BPHYT_RS00480 at 117.611 kb on + strand, within BPHYT_RS00480 at 117.611 kb on + strand, within BPHYT_RS00480 at 117.611 kb on + strand, within BPHYT_RS00480 at 117.611 kb on + strand, within BPHYT_RS00480 at 117.611 kb on + strand, within BPHYT_RS00480 at 117.612 kb on - strand, within BPHYT_RS00480 at 117.612 kb on - strand, within BPHYT_RS00480 at 117.612 kb on - strand, within BPHYT_RS00480 at 117.612 kb on - strand, within BPHYT_RS00480 at 118.003 kb on + strand at 118.178 kb on + strand at 118.343 kb on + strand, within BPHYT_RS00485 at 118.343 kb on + strand, within BPHYT_RS00485 at 118.344 kb on - strand, within BPHYT_RS00485 at 118.377 kb on - strand, within BPHYT_RS00485 at 118.430 kb on + strand, within BPHYT_RS00485 at 118.431 kb on - strand, within BPHYT_RS00485 at 118.565 kb on + strand, within BPHYT_RS00485 at 118.626 kb on - strand, within BPHYT_RS00485 at 118.626 kb on - strand, within BPHYT_RS00485 at 118.626 kb on - strand, within BPHYT_RS00485 at 118.887 kb on + strand, within BPHYT_RS00485 at 118.889 kb on + strand, within BPHYT_RS00485 at 118.889 kb on + strand, within BPHYT_RS00485 at 118.890 kb on - strand, within BPHYT_RS00485 at 118.890 kb on - strand, within BPHYT_RS00485 at 118.948 kb on - strand, within BPHYT_RS00485
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 115,150 + +0.7 115,294 + +0.5 115,294 + -0.5 115,294 + +0.5 115,294 + +0.2 115,524 + +1.0 115,613 + BPHYT_RS00480 0.10 -0.5 115,613 + BPHYT_RS00480 0.10 +1.7 115,716 - BPHYT_RS00480 0.14 -1.2 115,745 - BPHYT_RS00480 0.15 -0.1 115,863 - BPHYT_RS00480 0.20 +0.1 115,863 - BPHYT_RS00480 0.20 +1.8 116,063 + BPHYT_RS00480 0.27 -0.5 116,063 + BPHYT_RS00480 0.27 +1.7 116,063 + BPHYT_RS00480 0.27 -1.2 116,064 - BPHYT_RS00480 0.27 +0.5 116,064 - BPHYT_RS00480 0.27 -0.1 116,625 - BPHYT_RS00480 0.48 +3.2 116,625 - BPHYT_RS00480 0.48 -1.9 116,674 + BPHYT_RS00480 0.50 -0.1 116,675 - BPHYT_RS00480 0.50 -1.4 116,675 - BPHYT_RS00480 0.50 -1.3 116,678 + BPHYT_RS00480 0.50 -0.7 116,678 + BPHYT_RS00480 0.50 +0.2 116,679 - BPHYT_RS00480 0.50 +0.5 117,230 + BPHYT_RS00480 0.71 -2.0 117,290 + BPHYT_RS00480 0.74 -1.4 117,291 - BPHYT_RS00480 0.74 -0.4 117,378 - BPHYT_RS00480 0.77 -3.7 117,500 + BPHYT_RS00480 0.81 -1.4 117,501 - BPHYT_RS00480 0.82 -2.4 117,501 - BPHYT_RS00480 0.82 -1.0 117,501 - BPHYT_RS00480 0.82 -0.4 117,569 + BPHYT_RS00480 0.84 +0.7 117,611 + BPHYT_RS00480 0.86 -0.8 117,611 + BPHYT_RS00480 0.86 -1.5 117,611 + BPHYT_RS00480 0.86 -2.5 117,611 + BPHYT_RS00480 0.86 -0.5 117,611 + BPHYT_RS00480 0.86 -1.7 117,612 - BPHYT_RS00480 0.86 -0.5 117,612 - BPHYT_RS00480 0.86 +1.3 117,612 - BPHYT_RS00480 0.86 -0.6 117,612 - BPHYT_RS00480 0.86 -1.4 118,003 + +1.1 118,178 + -1.7 118,343 + BPHYT_RS00485 0.22 -0.7 118,343 + BPHYT_RS00485 0.22 +1.6 118,344 - BPHYT_RS00485 0.23 +0.1 118,377 - BPHYT_RS00485 0.25 +2.5 118,430 + BPHYT_RS00485 0.29 -0.3 118,431 - BPHYT_RS00485 0.29 +0.6 118,565 + BPHYT_RS00485 0.39 +0.4 118,626 - BPHYT_RS00485 0.44 +0.6 118,626 - BPHYT_RS00485 0.44 +1.6 118,626 - BPHYT_RS00485 0.44 +0.2 118,887 + BPHYT_RS00485 0.64 -2.6 118,889 + BPHYT_RS00485 0.64 +0.4 118,889 + BPHYT_RS00485 0.64 -3.8 118,890 - BPHYT_RS00485 0.64 -1.6 118,890 - BPHYT_RS00485 0.64 -1.2 118,948 - BPHYT_RS00485 0.68 +0.3
Or see this region's nucleotide sequence