Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00170

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
44,059	+				+2.9
44,059	+				+0.1
44,129	+				+0.2
44,130	-				-0.6
44,133	+				-0.1
44,155	+				-0.4
44,163	+				+0.3
44,178	+				+0.3
44,302	-		BPHYT_RS00165	0.14	+1.1
44,362	-		BPHYT_RS00165	0.21	+1.7
44,847	+		BPHYT_RS00165	0.79	+0.1
44,868	+		BPHYT_RS00165	0.81	+2.1
44,868	+		BPHYT_RS00165	0.81	+0.4
44,893	-		BPHYT_RS00165	0.84	+0.3
44,893	-		BPHYT_RS00165	0.84	+0.1
45,016	-				+0.6
45,065	+				+0.2
45,200	+		BPHYT_RS00170	0.26	-0.4
45,201	-		BPHYT_RS00170	0.26	+1.3
45,315	-		BPHYT_RS00170	0.45	+0.1
45,380	+		BPHYT_RS00170	0.56	-1.1
45,390	-		BPHYT_RS00170	0.58	+0.3
45,571	-				+0.1
45,571	-		BPHYT_RS00170	0.89	-0.0
45,625	+				-0.5
45,626	-				+0.3
45,626	-				+1.0
45,626	-				-0.4
45,650	-				+0.0
45,706	-				+3.7
45,706	-				-1.3
45,855	-				+0.7
45,995	+				+0.2
46,036	+				+0.1
46,042	-				+0.3
46,085	+				+0.9
46,086	-				-0.8
46,106	+				+1.1
46,107	-				+0.9
46,125	+				+0.0
46,136	-				+0.1
46,137	+				-0.4
46,138	-				+1.5
46,138	-				-0.2
46,146	+				+2.3
46,156	-				+0.4
46,187	+				+2.0
46,359	-				+0.2
46,376	+				+0.9
46,377	-				+0.8
46,383	-				+0.1
46,401	+				+0.9
46,401	+				-0.9
46,401	+				+2.2
46,401	+				-0.9
46,471	+				+0.1
46,567	+				-1.0
46,567	+				+2.1
46,603	+				+0.4
46,603	+				+1.3
46,604	-				-0.6
46,604	-				-1.4
46,604	-				-0.9
46,604	-				-0.3