Experiment: D-Glucose 16.67 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.636.1 and Xcc-8004.637.1 overlap by 8 nucleotides Xcc-8004.637.1 and Xcc-8004.638.1 are separated by 223 nucleotides
Xcc-8004.636.1: Xcc-8004.636.1 - Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-), at 580,931 to 581,548
Xcc-8004.636.1
Xcc-8004.637.1: Xcc-8004.637.1 - Bacterioferritin-associated ferredoxin, at 581,541 to 581,837
Xcc-8004.637.1
Xcc-8004.638.1: Xcc-8004.638.1 - Bacterioferritin, at 582,061 to 582,531
Xcc-8004.638.1
Position (kb) 580
581
582 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 580.084 kb on - strand at 580.173 kb on + strand at 580.208 kb on + strand at 580.208 kb on + strand at 580.209 kb on - strand at 580.209 kb on - strand at 580.241 kb on + strand at 580.241 kb on + strand at 580.250 kb on + strand at 580.250 kb on + strand at 580.250 kb on + strand at 580.251 kb on - strand at 580.304 kb on - strand at 580.323 kb on + strand at 580.323 kb on + strand at 580.323 kb on + strand at 580.323 kb on + strand at 580.324 kb on - strand at 580.324 kb on - strand at 580.324 kb on - strand at 580.324 kb on - strand at 580.324 kb on - strand at 580.365 kb on + strand at 580.428 kb on + strand at 580.428 kb on + strand at 580.429 kb on - strand at 580.429 kb on - strand at 580.463 kb on + strand at 580.463 kb on + strand at 580.464 kb on - strand at 580.464 kb on - strand at 580.543 kb on + strand at 580.543 kb on + strand at 580.543 kb on + strand at 580.543 kb on + strand at 580.543 kb on + strand at 580.543 kb on + strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.544 kb on - strand at 580.588 kb on + strand at 580.589 kb on - strand at 580.589 kb on - strand at 580.589 kb on - strand at 580.685 kb on - strand at 580.685 kb on - strand at 580.687 kb on - strand at 580.687 kb on - strand at 580.687 kb on - strand at 580.687 kb on - strand at 580.687 kb on - strand at 580.687 kb on - strand at 580.815 kb on - strand at 580.909 kb on + strand at 580.909 kb on + strand at 580.909 kb on + strand at 580.910 kb on - strand at 580.910 kb on - strand at 581.053 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.081 kb on + strand, within Xcc-8004.636.1 at 581.082 kb on - strand, within Xcc-8004.636.1 at 581.082 kb on - strand, within Xcc-8004.636.1 at 581.082 kb on - strand, within Xcc-8004.636.1 at 581.154 kb on + strand, within Xcc-8004.636.1 at 581.155 kb on - strand, within Xcc-8004.636.1 at 581.166 kb on + strand, within Xcc-8004.636.1 at 581.275 kb on + strand, within Xcc-8004.636.1 at 581.275 kb on + strand, within Xcc-8004.636.1 at 581.276 kb on - strand, within Xcc-8004.636.1 at 581.360 kb on + strand, within Xcc-8004.636.1 at 581.360 kb on + strand, within Xcc-8004.636.1 at 581.360 kb on + strand, within Xcc-8004.636.1 at 581.360 kb on + strand, within Xcc-8004.636.1 at 581.360 kb on + strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.361 kb on - strand, within Xcc-8004.636.1 at 581.506 kb on + strand at 581.506 kb on + strand at 581.507 kb on - strand at 581.507 kb on - strand at 581.539 kb on + strand at 581.540 kb on - strand at 581.540 kb on - strand at 581.565 kb on + strand at 581.565 kb on + strand at 581.565 kb on + strand at 581.565 kb on + strand at 581.566 kb on - strand at 581.566 kb on - strand at 581.631 kb on + strand, within Xcc-8004.637.1 at 581.631 kb on + strand, within Xcc-8004.637.1 at 581.631 kb on + strand, within Xcc-8004.637.1 at 581.631 kb on + strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.632 kb on - strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.645 kb on + strand, within Xcc-8004.637.1 at 581.646 kb on - strand, within Xcc-8004.637.1 at 581.646 kb on - strand, within Xcc-8004.637.1 at 581.646 kb on - strand, within Xcc-8004.637.1 at 581.646 kb on - strand, within Xcc-8004.637.1 at 581.853 kb on + strand at 581.853 kb on + strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.854 kb on - strand at 581.891 kb on + strand at 581.891 kb on + strand at 581.891 kb on + strand at 581.891 kb on + strand at 581.891 kb on + strand at 581.892 kb on - strand at 581.892 kb on - strand at 581.892 kb on - strand at 581.917 kb on + strand at 581.917 kb on + strand at 581.917 kb on + strand at 581.918 kb on - strand at 582.025 kb on + strand at 582.025 kb on + strand at 582.026 kb on - strand at 582.026 kb on - strand at 582.026 kb on - strand at 582.089 kb on - strand at 582.089 kb on - strand at 582.089 kb on - strand at 582.106 kb on + strand at 582.106 kb on + strand at 582.106 kb on + strand at 582.106 kb on + strand at 582.107 kb on - strand at 582.107 kb on - strand at 582.107 kb on - strand at 582.107 kb on - strand at 582.107 kb on - strand at 582.134 kb on - strand, within Xcc-8004.638.1 at 582.193 kb on + strand, within Xcc-8004.638.1 at 582.193 kb on + strand, within Xcc-8004.638.1 at 582.193 kb on + strand, within Xcc-8004.638.1 at 582.193 kb on + strand, within Xcc-8004.638.1 at 582.193 kb on + strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.194 kb on - strand, within Xcc-8004.638.1 at 582.379 kb on + strand, within Xcc-8004.638.1 at 582.380 kb on - strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.400 kb on + strand, within Xcc-8004.638.1 at 582.401 kb on - strand, within Xcc-8004.638.1 at 582.401 kb on - strand, within Xcc-8004.638.1 at 582.505 kb on + strand at 582.505 kb on + strand at 582.506 kb on - strand at 582.506 kb on - strand at 582.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 16.67 mM (C) remove 580,084 - -0.6 580,173 + +0.2 580,208 + +0.5 580,208 + -0.3 580,209 - -1.1 580,209 - +0.3 580,241 + +0.6 580,241 + +0.8 580,250 + +1.7 580,250 + -1.9 580,250 + +0.1 580,251 - +0.1 580,304 - +0.6 580,323 + +0.1 580,323 + +0.1 580,323 + -0.4 580,323 + -0.7 580,324 - -0.1 580,324 - -0.7 580,324 - +0.2 580,324 - -0.2 580,324 - -0.2 580,365 + -0.2 580,428 + +0.9 580,428 + -0.4 580,429 - +0.0 580,429 - +0.4 580,463 + -0.8 580,463 + -0.1 580,464 - +0.5 580,464 - -1.1 580,543 + +0.9 580,543 + +0.5 580,543 + +0.7 580,543 + -0.7 580,543 + -0.7 580,543 + +0.2 580,544 - +0.5 580,544 - +0.6 580,544 - +0.1 580,544 - -1.1 580,588 + +1.5 580,589 - +0.5 580,589 - -1.3 580,589 - +0.6 580,685 - +0.5 580,685 - +1.6 580,687 - +1.4 580,687 - +0.5 580,687 - -0.1 580,687 - +0.6 580,687 - +0.3 580,687 - +0.1 580,815 - -1.1 580,909 + -0.1 580,909 + -0.8 580,909 + +0.2 580,910 - -1.1 580,910 - -0.8 581,053 + Xcc-8004.636.1 0.20 -2.4 581,081 + Xcc-8004.636.1 0.24 -0.9 581,081 + Xcc-8004.636.1 0.24 +0.2 581,081 + Xcc-8004.636.1 0.24 -0.8 581,081 + Xcc-8004.636.1 0.24 +0.1 581,081 + Xcc-8004.636.1 0.24 -2.8 581,081 + Xcc-8004.636.1 0.24 -0.9 581,081 + Xcc-8004.636.1 0.24 -2.6 581,082 - Xcc-8004.636.1 0.24 -1.3 581,082 - Xcc-8004.636.1 0.24 -2.1 581,082 - Xcc-8004.636.1 0.24 -0.9 581,154 + Xcc-8004.636.1 0.36 -0.2 581,155 - Xcc-8004.636.1 0.36 -0.2 581,166 + Xcc-8004.636.1 0.38 -2.1 581,275 + Xcc-8004.636.1 0.56 -1.2 581,275 + Xcc-8004.636.1 0.56 -1.5 581,276 - Xcc-8004.636.1 0.56 -3.1 581,360 + Xcc-8004.636.1 0.69 -1.9 581,360 + Xcc-8004.636.1 0.69 -1.4 581,360 + Xcc-8004.636.1 0.69 -1.6 581,360 + Xcc-8004.636.1 0.69 -0.9 581,360 + Xcc-8004.636.1 0.69 -1.1 581,361 - Xcc-8004.636.1 0.70 -3.3 581,361 - Xcc-8004.636.1 0.70 -3.3 581,361 - Xcc-8004.636.1 0.70 -2.6 581,361 - Xcc-8004.636.1 0.70 -2.8 581,361 - Xcc-8004.636.1 0.70 -0.5 581,361 - Xcc-8004.636.1 0.70 +0.5 581,361 - Xcc-8004.636.1 0.70 -2.5 581,506 + -0.3 581,506 + +0.5 581,507 - -0.8 581,507 - -0.8 581,539 + +0.3 581,540 - -1.4 581,540 - -0.9 581,565 + +0.6 581,565 + -0.6 581,565 + -0.3 581,565 + -0.3 581,566 - +0.3 581,566 - +0.5 581,631 + Xcc-8004.637.1 0.30 -0.3 581,631 + Xcc-8004.637.1 0.30 +0.3 581,631 + Xcc-8004.637.1 0.30 -0.5 581,631 + Xcc-8004.637.1 0.30 -0.4 581,632 - Xcc-8004.637.1 0.31 -0.5 581,632 - Xcc-8004.637.1 0.31 -2.2 581,632 - Xcc-8004.637.1 0.31 -0.1 581,632 - Xcc-8004.637.1 0.31 +0.3 581,632 - Xcc-8004.637.1 0.31 -0.5 581,632 - Xcc-8004.637.1 0.31 -0.3 581,632 - Xcc-8004.637.1 0.31 -0.5 581,645 + Xcc-8004.637.1 0.35 +0.2 581,645 + Xcc-8004.637.1 0.35 -0.6 581,645 + Xcc-8004.637.1 0.35 -0.2 581,645 + Xcc-8004.637.1 0.35 -0.1 581,645 + Xcc-8004.637.1 0.35 -0.1 581,645 + Xcc-8004.637.1 0.35 -0.9 581,646 - Xcc-8004.637.1 0.35 +0.9 581,646 - Xcc-8004.637.1 0.35 -2.4 581,646 - Xcc-8004.637.1 0.35 +0.0 581,646 - Xcc-8004.637.1 0.35 +0.2 581,853 + -0.8 581,853 + -0.6 581,854 - -0.9 581,854 - -0.8 581,854 - -0.2 581,854 - +0.2 581,854 - +0.4 581,854 - -1.1 581,854 - +1.0 581,891 + +0.7 581,891 + -0.5 581,891 + +0.5 581,891 + +0.5 581,891 + -1.6 581,892 - -0.0 581,892 - -1.5 581,892 - -0.1 581,917 + -0.1 581,917 + -1.2 581,917 + -0.3 581,918 - +0.9 582,025 + +0.3 582,025 + -0.5 582,026 - +0.6 582,026 - +0.6 582,026 - -1.1 582,089 - -0.5 582,089 - +1.1 582,089 - +1.4 582,106 + +1.8 582,106 + +1.1 582,106 + +1.2 582,106 + +0.6 582,107 - +1.1 582,107 - +1.7 582,107 - +0.2 582,107 - +0.7 582,107 - +0.7 582,134 - Xcc-8004.638.1 0.15 +1.2 582,193 + Xcc-8004.638.1 0.28 +1.4 582,193 + Xcc-8004.638.1 0.28 +1.4 582,193 + Xcc-8004.638.1 0.28 +1.3 582,193 + Xcc-8004.638.1 0.28 +1.0 582,193 + Xcc-8004.638.1 0.28 +2.2 582,194 - Xcc-8004.638.1 0.28 +0.9 582,194 - Xcc-8004.638.1 0.28 -0.2 582,194 - Xcc-8004.638.1 0.28 +1.1 582,194 - Xcc-8004.638.1 0.28 +1.0 582,194 - Xcc-8004.638.1 0.28 +1.1 582,194 - Xcc-8004.638.1 0.28 +1.6 582,194 - Xcc-8004.638.1 0.28 +1.2 582,194 - Xcc-8004.638.1 0.28 +1.5 582,194 - Xcc-8004.638.1 0.28 +1.0 582,194 - Xcc-8004.638.1 0.28 +0.8 582,194 - Xcc-8004.638.1 0.28 +0.5 582,194 - Xcc-8004.638.1 0.28 +1.6 582,194 - Xcc-8004.638.1 0.28 +0.7 582,194 - Xcc-8004.638.1 0.28 +1.5 582,194 - Xcc-8004.638.1 0.28 +0.8 582,194 - Xcc-8004.638.1 0.28 +0.4 582,379 + Xcc-8004.638.1 0.68 +1.2 582,380 - Xcc-8004.638.1 0.68 +1.7 582,400 + Xcc-8004.638.1 0.72 +1.9 582,400 + Xcc-8004.638.1 0.72 +2.0 582,400 + Xcc-8004.638.1 0.72 +2.3 582,400 + Xcc-8004.638.1 0.72 +0.7 582,400 + Xcc-8004.638.1 0.72 +1.5 582,400 + Xcc-8004.638.1 0.72 +0.5 582,400 + Xcc-8004.638.1 0.72 +1.5 582,400 + Xcc-8004.638.1 0.72 +0.9 582,400 + Xcc-8004.638.1 0.72 -0.5 582,400 + Xcc-8004.638.1 0.72 -2.3 582,400 + Xcc-8004.638.1 0.72 +1.8 582,401 - Xcc-8004.638.1 0.72 +0.0 582,401 - Xcc-8004.638.1 0.72 +1.1 582,505 + +1.6 582,505 + +1.3 582,506 - +1.6 582,506 - +1.5 582,530 - +1.0
Or see this region's nucleotide sequence