Experiment: D-Glucose 16.67 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.4911.1 and Xcc-8004.4912.1 are separated by 528 nucleotides Xcc-8004.4912.1 and Xcc-8004.4913.1 are separated by 288 nucleotides Xcc-8004.4913.1 and Xcc-8004.4915.1 are separated by 190 nucleotides
Xcc-8004.4911.1: Xcc-8004.4911.1 - FIG01210100: hypothetical protein, at 4,673,214 to 4,673,996
Xcc-8004.4911.1
Xcc-8004.4912.1: Xcc-8004.4912.1 - FIG01210621: hypothetical protein, at 4,674,525 to 4,675,184
Xcc-8004.4912.1
Xcc-8004.4913.1: Xcc-8004.4913.1 - Nitrogen regulatory protein P-II, at 4,675,473 to 4,675,811
Xcc-8004.4913.1
Xcc-8004.4915.1: Xcc-8004.4915.1 - FIG01211043: hypothetical protein, at 4,676,002 to 4,676,274
Xcc-8004.4915.1
Position (kb) 4674
4675
4676 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4673.641 kb on + strand, within Xcc-8004.4911.1 at 4673.642 kb on - strand, within Xcc-8004.4911.1 at 4673.642 kb on - strand, within Xcc-8004.4911.1 at 4673.642 kb on - strand, within Xcc-8004.4911.1 at 4673.672 kb on + strand, within Xcc-8004.4911.1 at 4673.672 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.725 kb on + strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.726 kb on - strand, within Xcc-8004.4911.1 at 4673.774 kb on + strand, within Xcc-8004.4911.1 at 4673.810 kb on + strand, within Xcc-8004.4911.1 at 4673.810 kb on + strand, within Xcc-8004.4911.1 at 4673.811 kb on - strand, within Xcc-8004.4911.1 at 4673.811 kb on - strand, within Xcc-8004.4911.1 at 4673.811 kb on - strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.843 kb on + strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.844 kb on - strand, within Xcc-8004.4911.1 at 4673.903 kb on - strand, within Xcc-8004.4911.1 at 4674.090 kb on + strand at 4674.090 kb on + strand at 4674.090 kb on + strand at 4674.091 kb on - strand at 4674.091 kb on - strand at 4674.091 kb on - strand at 4674.117 kb on + strand at 4674.117 kb on + strand at 4674.117 kb on + strand at 4674.117 kb on + strand at 4674.118 kb on - strand at 4674.118 kb on - strand at 4674.215 kb on + strand at 4674.215 kb on + strand at 4674.216 kb on - strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.293 kb on + strand at 4674.294 kb on - strand at 4674.294 kb on - strand at 4674.294 kb on - strand at 4674.294 kb on - strand at 4674.322 kb on + strand at 4674.322 kb on + strand at 4674.323 kb on - strand at 4674.323 kb on - strand at 4674.323 kb on - strand at 4674.323 kb on - strand at 4674.323 kb on - strand at 4674.438 kb on + strand at 4674.439 kb on - strand at 4674.439 kb on - strand at 4674.444 kb on + strand at 4674.445 kb on - strand at 4674.531 kb on + strand at 4674.531 kb on + strand at 4674.532 kb on - strand at 4674.532 kb on - strand at 4674.532 kb on - strand at 4674.616 kb on - strand, within Xcc-8004.4912.1 at 4674.616 kb on - strand, within Xcc-8004.4912.1 at 4674.616 kb on - strand, within Xcc-8004.4912.1 at 4674.657 kb on + strand, within Xcc-8004.4912.1 at 4674.658 kb on - strand, within Xcc-8004.4912.1 at 4674.658 kb on - strand, within Xcc-8004.4912.1 at 4674.994 kb on + strand, within Xcc-8004.4912.1 at 4675.155 kb on + strand at 4675.286 kb on + strand at 4675.286 kb on + strand at 4675.286 kb on + strand at 4675.287 kb on - strand at 4675.287 kb on - strand at 4675.300 kb on + strand at 4675.301 kb on - strand at 4675.301 kb on - strand at 4675.301 kb on - strand at 4675.303 kb on + strand at 4675.303 kb on + strand at 4675.303 kb on + strand at 4675.303 kb on + strand at 4675.304 kb on - strand at 4675.304 kb on - strand at 4675.304 kb on - strand at 4675.304 kb on - strand at 4675.304 kb on - strand at 4675.433 kb on + strand at 4675.433 kb on + strand at 4675.433 kb on + strand at 4675.434 kb on - strand at 4675.434 kb on - strand at 4675.434 kb on - strand at 4675.434 kb on - strand at 4675.474 kb on + strand at 4675.474 kb on + strand at 4675.475 kb on - strand at 4675.475 kb on - strand at 4675.475 kb on - strand at 4675.475 kb on - strand at 4675.475 kb on - strand at 4675.531 kb on + strand, within Xcc-8004.4913.1 at 4675.532 kb on - strand, within Xcc-8004.4913.1 at 4675.660 kb on + strand, within Xcc-8004.4913.1 at 4675.660 kb on + strand, within Xcc-8004.4913.1 at 4675.660 kb on + strand, within Xcc-8004.4913.1 at 4675.660 kb on + strand, within Xcc-8004.4913.1 at 4675.660 kb on + strand, within Xcc-8004.4913.1 at 4675.661 kb on - strand, within Xcc-8004.4913.1 at 4675.661 kb on - strand, within Xcc-8004.4913.1 at 4675.661 kb on - strand, within Xcc-8004.4913.1 at 4675.661 kb on - strand, within Xcc-8004.4913.1 at 4675.675 kb on + strand, within Xcc-8004.4913.1 at 4675.676 kb on - strand, within Xcc-8004.4913.1 at 4675.847 kb on + strand at 4675.848 kb on - strand at 4675.917 kb on + strand at 4675.917 kb on + strand at 4675.918 kb on - strand at 4675.918 kb on - strand at 4675.918 kb on - strand at 4675.923 kb on + strand at 4675.923 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.955 kb on + strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.956 kb on - strand at 4675.971 kb on + strand at 4675.972 kb on - strand at 4675.972 kb on - strand at 4675.972 kb on - strand at 4675.980 kb on + strand at 4675.980 kb on + strand at 4675.980 kb on + strand at 4675.980 kb on + strand at 4675.981 kb on - strand at 4675.981 kb on - strand at 4675.981 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 16.67 mM (C) remove 4,673,641 + Xcc-8004.4911.1 0.55 +0.5 4,673,642 - Xcc-8004.4911.1 0.55 -0.0 4,673,642 - Xcc-8004.4911.1 0.55 -3.8 4,673,642 - Xcc-8004.4911.1 0.55 -0.7 4,673,672 + Xcc-8004.4911.1 0.58 -0.3 4,673,672 + Xcc-8004.4911.1 0.58 +0.4 4,673,725 + Xcc-8004.4911.1 0.65 -0.3 4,673,725 + Xcc-8004.4911.1 0.65 +0.3 4,673,725 + Xcc-8004.4911.1 0.65 +0.2 4,673,725 + Xcc-8004.4911.1 0.65 -1.8 4,673,725 + Xcc-8004.4911.1 0.65 +0.0 4,673,725 + Xcc-8004.4911.1 0.65 -0.5 4,673,725 + Xcc-8004.4911.1 0.65 +1.1 4,673,726 - Xcc-8004.4911.1 0.65 +0.5 4,673,726 - Xcc-8004.4911.1 0.65 -0.1 4,673,726 - Xcc-8004.4911.1 0.65 -0.8 4,673,726 - Xcc-8004.4911.1 0.65 +0.7 4,673,726 - Xcc-8004.4911.1 0.65 -0.7 4,673,726 - Xcc-8004.4911.1 0.65 -0.0 4,673,726 - Xcc-8004.4911.1 0.65 -1.4 4,673,726 - Xcc-8004.4911.1 0.65 -0.4 4,673,774 + Xcc-8004.4911.1 0.72 +0.3 4,673,810 + Xcc-8004.4911.1 0.76 -0.4 4,673,810 + Xcc-8004.4911.1 0.76 +1.1 4,673,811 - Xcc-8004.4911.1 0.76 +0.0 4,673,811 - Xcc-8004.4911.1 0.76 -0.8 4,673,811 - Xcc-8004.4911.1 0.76 -0.5 4,673,843 + Xcc-8004.4911.1 0.80 +0.2 4,673,843 + Xcc-8004.4911.1 0.80 +1.6 4,673,843 + Xcc-8004.4911.1 0.80 -0.8 4,673,843 + Xcc-8004.4911.1 0.80 -0.2 4,673,843 + Xcc-8004.4911.1 0.80 -1.0 4,673,843 + Xcc-8004.4911.1 0.80 -0.4 4,673,844 - Xcc-8004.4911.1 0.80 -0.0 4,673,844 - Xcc-8004.4911.1 0.80 -0.9 4,673,844 - Xcc-8004.4911.1 0.80 -0.2 4,673,844 - Xcc-8004.4911.1 0.80 +0.2 4,673,844 - Xcc-8004.4911.1 0.80 -0.4 4,673,844 - Xcc-8004.4911.1 0.80 +0.4 4,673,844 - Xcc-8004.4911.1 0.80 +0.6 4,673,903 - Xcc-8004.4911.1 0.88 -0.8 4,674,090 + -0.0 4,674,090 + +0.2 4,674,090 + -0.8 4,674,091 - +0.2 4,674,091 - -0.5 4,674,091 - +0.5 4,674,117 + -1.3 4,674,117 + +0.1 4,674,117 + -0.7 4,674,117 + -0.6 4,674,118 - -0.6 4,674,118 - -0.0 4,674,215 + +1.3 4,674,215 + -1.1 4,674,216 - +0.5 4,674,293 + +0.6 4,674,293 + +0.8 4,674,293 + +0.9 4,674,293 + -0.1 4,674,293 + +0.1 4,674,293 + -0.2 4,674,293 + +0.3 4,674,294 - +0.3 4,674,294 - +0.6 4,674,294 - +0.4 4,674,294 - +0.3 4,674,322 + +0.9 4,674,322 + +0.2 4,674,323 - +0.9 4,674,323 - -0.8 4,674,323 - +0.4 4,674,323 - +0.4 4,674,323 - -1.6 4,674,438 + +0.3 4,674,439 - +0.2 4,674,439 - +0.3 4,674,444 + -0.4 4,674,445 - +1.1 4,674,531 + -0.4 4,674,531 + -0.4 4,674,532 - -0.7 4,674,532 - +0.5 4,674,532 - -0.3 4,674,616 - Xcc-8004.4912.1 0.14 +1.1 4,674,616 - Xcc-8004.4912.1 0.14 -0.8 4,674,616 - Xcc-8004.4912.1 0.14 +0.3 4,674,657 + Xcc-8004.4912.1 0.20 -0.7 4,674,658 - Xcc-8004.4912.1 0.20 -1.0 4,674,658 - Xcc-8004.4912.1 0.20 -0.9 4,674,994 + Xcc-8004.4912.1 0.71 -0.4 4,675,155 + +2.4 4,675,286 + +0.6 4,675,286 + -1.4 4,675,286 + +0.2 4,675,287 - -0.4 4,675,287 - -0.4 4,675,300 + -0.5 4,675,301 - -0.1 4,675,301 - -0.3 4,675,301 - -0.7 4,675,303 + +0.2 4,675,303 + +0.6 4,675,303 + -1.0 4,675,303 + -0.2 4,675,304 - +0.1 4,675,304 - -0.7 4,675,304 - -0.8 4,675,304 - +0.3 4,675,304 - -0.0 4,675,433 + -0.3 4,675,433 + +0.0 4,675,433 + +0.6 4,675,434 - -0.0 4,675,434 - +1.2 4,675,434 - +0.7 4,675,434 - -0.8 4,675,474 + -1.5 4,675,474 + -0.6 4,675,475 - +0.7 4,675,475 - -0.9 4,675,475 - -0.5 4,675,475 - -0.1 4,675,475 - +0.0 4,675,531 + Xcc-8004.4913.1 0.17 +0.6 4,675,532 - Xcc-8004.4913.1 0.17 -1.4 4,675,660 + Xcc-8004.4913.1 0.55 +0.7 4,675,660 + Xcc-8004.4913.1 0.55 -0.3 4,675,660 + Xcc-8004.4913.1 0.55 +0.3 4,675,660 + Xcc-8004.4913.1 0.55 +0.4 4,675,660 + Xcc-8004.4913.1 0.55 +0.2 4,675,661 - Xcc-8004.4913.1 0.55 +0.8 4,675,661 - Xcc-8004.4913.1 0.55 -0.0 4,675,661 - Xcc-8004.4913.1 0.55 -1.8 4,675,661 - Xcc-8004.4913.1 0.55 -0.1 4,675,675 + Xcc-8004.4913.1 0.60 +0.1 4,675,676 - Xcc-8004.4913.1 0.60 -0.1 4,675,847 + -0.7 4,675,848 - -0.8 4,675,917 + -0.4 4,675,917 + +0.2 4,675,918 - -0.2 4,675,918 - -0.4 4,675,918 - -0.1 4,675,923 + -1.2 4,675,923 + -0.6 4,675,955 + -0.7 4,675,955 + -0.2 4,675,955 + -0.9 4,675,955 + +0.2 4,675,955 + -1.1 4,675,955 + -2.0 4,675,955 + -0.3 4,675,955 + +0.3 4,675,955 + -0.3 4,675,955 + -0.3 4,675,955 + +1.1 4,675,955 + +0.3 4,675,955 + -0.4 4,675,955 + -1.0 4,675,956 - -0.2 4,675,956 - +0.6 4,675,956 - -1.5 4,675,956 - +0.2 4,675,956 - -0.0 4,675,956 - -0.0 4,675,956 - -0.7 4,675,971 + +0.3 4,675,972 - +0.1 4,675,972 - -0.8 4,675,972 - -0.3 4,675,980 + +0.6 4,675,980 + -2.4 4,675,980 + -0.6 4,675,980 + -0.6 4,675,981 - -1.3 4,675,981 - +0.4 4,675,981 - +0.5
Or see this region's nucleotide sequence