Experiment: D-Glucose 16.67 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.4312.1 and Xcc-8004.4313.1 overlap by 4 nucleotides Xcc-8004.4313.1 and Xcc-8004.4314.1 are separated by 23 nucleotides Xcc-8004.4314.1 and Xcc-8004.4315.1 are separated by 277 nucleotides
Xcc-8004.4312.1: Xcc-8004.4312.1 - putative membrane protein, at 4,132,943 to 4,133,986
Xcc-8004.4312.1
Xcc-8004.4313.1: Xcc-8004.4313.1 - hypothetical protein, at 4,133,983 to 4,134,612
Xcc-8004.4313.1
Xcc-8004.4314.1: Xcc-8004.4314.1 - Phosphoenolpyruvate carboxylase (EC 4.1.1.31), at 4,134,636 to 4,137,350
Xcc-8004.4314.1
Xcc-8004.4315.1: Xcc-8004.4315.1 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 4,137,628 to 4,140,135
Xcc-8004.4315.1
Position (kb) 4134
4135
4136
4137
4138 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 4133.899 kb on - strand at 4134.173 kb on - strand, within Xcc-8004.4313.1 at 4134.173 kb on - strand, within Xcc-8004.4313.1 at 4134.460 kb on + strand, within Xcc-8004.4313.1 at 4134.461 kb on - strand, within Xcc-8004.4313.1 at 4134.772 kb on + strand at 4134.772 kb on + strand at 4134.773 kb on - strand at 4134.961 kb on - strand, within Xcc-8004.4314.1 at 4135.078 kb on + strand, within Xcc-8004.4314.1 at 4135.234 kb on + strand, within Xcc-8004.4314.1 at 4135.235 kb on - strand, within Xcc-8004.4314.1 at 4135.396 kb on - strand, within Xcc-8004.4314.1 at 4135.417 kb on + strand, within Xcc-8004.4314.1 at 4135.417 kb on + strand, within Xcc-8004.4314.1 at 4135.418 kb on - strand, within Xcc-8004.4314.1 at 4135.708 kb on + strand, within Xcc-8004.4314.1 at 4135.708 kb on + strand, within Xcc-8004.4314.1 at 4135.709 kb on - strand, within Xcc-8004.4314.1 at 4135.888 kb on + strand, within Xcc-8004.4314.1 at 4135.889 kb on - strand, within Xcc-8004.4314.1 at 4135.889 kb on - strand, within Xcc-8004.4314.1 at 4136.008 kb on + strand, within Xcc-8004.4314.1 at 4136.009 kb on - strand, within Xcc-8004.4314.1 at 4136.009 kb on - strand, within Xcc-8004.4314.1 at 4136.650 kb on + strand, within Xcc-8004.4314.1 at 4136.650 kb on + strand, within Xcc-8004.4314.1 at 4136.650 kb on + strand, within Xcc-8004.4314.1 at 4136.650 kb on + strand, within Xcc-8004.4314.1 at 4136.650 kb on + strand, within Xcc-8004.4314.1 at 4136.651 kb on - strand, within Xcc-8004.4314.1 at 4136.651 kb on - strand, within Xcc-8004.4314.1 at 4136.651 kb on - strand, within Xcc-8004.4314.1 at 4136.651 kb on - strand, within Xcc-8004.4314.1 at 4136.689 kb on + strand, within Xcc-8004.4314.1 at 4136.689 kb on + strand, within Xcc-8004.4314.1 at 4136.690 kb on - strand, within Xcc-8004.4314.1 at 4136.690 kb on - strand, within Xcc-8004.4314.1 at 4136.690 kb on - strand, within Xcc-8004.4314.1 at 4137.037 kb on + strand, within Xcc-8004.4314.1 at 4137.094 kb on + strand at 4137.094 kb on + strand at 4137.094 kb on + strand at 4137.094 kb on + strand at 4137.095 kb on - strand at 4137.095 kb on - strand at 4137.098 kb on + strand at 4137.098 kb on + strand at 4137.406 kb on + strand at 4137.478 kb on - strand at 4137.540 kb on + strand at 4137.541 kb on - strand at 4137.732 kb on - strand at 4137.887 kb on + strand, within Xcc-8004.4315.1 at 4137.887 kb on + strand, within Xcc-8004.4315.1 at 4137.888 kb on - strand, within Xcc-8004.4315.1 at 4137.888 kb on - strand, within Xcc-8004.4315.1 at 4137.888 kb on - strand, within Xcc-8004.4315.1 at 4137.911 kb on + strand, within Xcc-8004.4315.1 at 4137.932 kb on + strand, within Xcc-8004.4315.1 at 4137.932 kb on + strand, within Xcc-8004.4315.1 at 4137.981 kb on - strand, within Xcc-8004.4315.1 at 4138.056 kb on - strand, within Xcc-8004.4315.1 at 4138.127 kb on + strand, within Xcc-8004.4315.1 at 4138.154 kb on + strand, within Xcc-8004.4315.1 at 4138.155 kb on - strand, within Xcc-8004.4315.1 at 4138.220 kb on + strand, within Xcc-8004.4315.1 at 4138.254 kb on - strand, within Xcc-8004.4315.1 at 4138.254 kb on - strand, within Xcc-8004.4315.1 at 4138.274 kb on + strand, within Xcc-8004.4315.1 at 4138.274 kb on + strand, within Xcc-8004.4315.1
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 16.67 mM (C) remove 4,133,899 - -2.5 4,134,173 - Xcc-8004.4313.1 0.30 -0.4 4,134,173 - Xcc-8004.4313.1 0.30 +1.0 4,134,460 + Xcc-8004.4313.1 0.76 -1.0 4,134,461 - Xcc-8004.4313.1 0.76 -1.5 4,134,772 + -2.2 4,134,772 + -1.9 4,134,773 - -3.5 4,134,961 - Xcc-8004.4314.1 0.12 -2.1 4,135,078 + Xcc-8004.4314.1 0.16 -2.9 4,135,234 + Xcc-8004.4314.1 0.22 -3.3 4,135,235 - Xcc-8004.4314.1 0.22 -2.7 4,135,396 - Xcc-8004.4314.1 0.28 -0.4 4,135,417 + Xcc-8004.4314.1 0.29 -2.0 4,135,417 + Xcc-8004.4314.1 0.29 -0.6 4,135,418 - Xcc-8004.4314.1 0.29 -1.9 4,135,708 + Xcc-8004.4314.1 0.39 -2.9 4,135,708 + Xcc-8004.4314.1 0.39 -3.3 4,135,709 - Xcc-8004.4314.1 0.40 -3.1 4,135,888 + Xcc-8004.4314.1 0.46 -3.9 4,135,889 - Xcc-8004.4314.1 0.46 -4.1 4,135,889 - Xcc-8004.4314.1 0.46 -3.0 4,136,008 + Xcc-8004.4314.1 0.51 -2.5 4,136,009 - Xcc-8004.4314.1 0.51 -3.7 4,136,009 - Xcc-8004.4314.1 0.51 -2.8 4,136,650 + Xcc-8004.4314.1 0.74 -2.0 4,136,650 + Xcc-8004.4314.1 0.74 -0.1 4,136,650 + Xcc-8004.4314.1 0.74 -2.4 4,136,650 + Xcc-8004.4314.1 0.74 -3.1 4,136,650 + Xcc-8004.4314.1 0.74 -3.1 4,136,651 - Xcc-8004.4314.1 0.74 -3.4 4,136,651 - Xcc-8004.4314.1 0.74 -3.4 4,136,651 - Xcc-8004.4314.1 0.74 -2.7 4,136,651 - Xcc-8004.4314.1 0.74 -1.0 4,136,689 + Xcc-8004.4314.1 0.76 -2.1 4,136,689 + Xcc-8004.4314.1 0.76 -2.9 4,136,690 - Xcc-8004.4314.1 0.76 -1.8 4,136,690 - Xcc-8004.4314.1 0.76 -2.4 4,136,690 - Xcc-8004.4314.1 0.76 -4.1 4,137,037 + Xcc-8004.4314.1 0.88 -2.7 4,137,094 + -1.3 4,137,094 + -0.7 4,137,094 + -4.0 4,137,094 + -3.5 4,137,095 - -3.2 4,137,095 - -1.7 4,137,098 + -0.1 4,137,098 + -1.2 4,137,406 + -1.4 4,137,478 - +0.2 4,137,540 + +2.4 4,137,541 - -0.8 4,137,732 - +0.3 4,137,887 + Xcc-8004.4315.1 0.10 -0.2 4,137,887 + Xcc-8004.4315.1 0.10 +0.6 4,137,888 - Xcc-8004.4315.1 0.10 +1.7 4,137,888 - Xcc-8004.4315.1 0.10 -0.1 4,137,888 - Xcc-8004.4315.1 0.10 -1.1 4,137,911 + Xcc-8004.4315.1 0.11 -2.3 4,137,932 + Xcc-8004.4315.1 0.12 +0.8 4,137,932 + Xcc-8004.4315.1 0.12 +2.8 4,137,981 - Xcc-8004.4315.1 0.14 -0.4 4,138,056 - Xcc-8004.4315.1 0.17 -0.5 4,138,127 + Xcc-8004.4315.1 0.20 -0.7 4,138,154 + Xcc-8004.4315.1 0.21 -1.0 4,138,155 - Xcc-8004.4315.1 0.21 -0.2 4,138,220 + Xcc-8004.4315.1 0.24 +0.0 4,138,254 - Xcc-8004.4315.1 0.25 -0.8 4,138,254 - Xcc-8004.4315.1 0.25 +0.2 4,138,274 + Xcc-8004.4315.1 0.26 +0.4 4,138,274 + Xcc-8004.4315.1 0.26 +1.0
Or see this region's nucleotide sequence