Experiment: D-Glucose 16.67 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.4304.1 and Xcc-8004.4305.1 are separated by 243 nucleotides Xcc-8004.4305.1 and Xcc-8004.4306.1 are separated by 265 nucleotides Xcc-8004.4306.1 and Xcc-8004.4307.1 are separated by 499 nucleotides
Xcc-8004.4304.1: Xcc-8004.4304.1 - FIG01210543: hypothetical protein, at 4,120,988 to 4,122,070
Xcc-8004.4304.1
Xcc-8004.4305.1: Xcc-8004.4305.1 - S-adenosylmethionine synthetase (EC 2.5.1.6), at 4,122,314 to 4,123,525
Xcc-8004.4305.1
Xcc-8004.4306.1: Xcc-8004.4306.1 - hypothetical protein, at 4,123,791 to 4,123,988
Xcc-8004.4306.1
Xcc-8004.4307.1: Xcc-8004.4307.1 - Probable histidine acid phosphatase (EC 3.1.3.2), at 4,124,488 to 4,125,819
Xcc-8004.4307.1
Position (kb)
4122
4123
4124 Strain fitness (log2 ratio)
-2
-1
0
1 at 4121.410 kb on - strand, within Xcc-8004.4304.1 at 4121.410 kb on - strand, within Xcc-8004.4304.1 at 4121.562 kb on + strand, within Xcc-8004.4304.1 at 4121.563 kb on - strand, within Xcc-8004.4304.1 at 4121.563 kb on - strand, within Xcc-8004.4304.1 at 4121.665 kb on - strand, within Xcc-8004.4304.1 at 4121.714 kb on + strand, within Xcc-8004.4304.1 at 4121.739 kb on + strand, within Xcc-8004.4304.1 at 4121.739 kb on + strand, within Xcc-8004.4304.1 at 4121.740 kb on - strand, within Xcc-8004.4304.1 at 4122.090 kb on + strand at 4122.090 kb on + strand at 4122.091 kb on - strand at 4122.091 kb on - strand at 4122.091 kb on - strand at 4122.176 kb on + strand at 4122.176 kb on + strand at 4122.177 kb on - strand at 4122.177 kb on - strand at 4122.267 kb on + strand at 4122.268 kb on - strand at 4123.523 kb on + strand at 4123.623 kb on - strand at 4123.663 kb on - strand at 4123.678 kb on - strand at 4123.761 kb on + strand at 4123.761 kb on + strand at 4123.761 kb on + strand at 4123.762 kb on - strand at 4123.771 kb on + strand at 4123.772 kb on - strand at 4123.772 kb on - strand at 4123.799 kb on + strand at 4123.892 kb on - strand, within Xcc-8004.4306.1 at 4123.892 kb on - strand, within Xcc-8004.4306.1 at 4123.921 kb on + strand, within Xcc-8004.4306.1 at 4123.969 kb on + strand at 4124.032 kb on - strand at 4124.032 kb on - strand at 4124.139 kb on - strand at 4124.241 kb on + strand at 4124.241 kb on + strand at 4124.303 kb on + strand at 4124.304 kb on - strand at 4124.304 kb on - strand at 4124.304 kb on - strand at 4124.304 kb on - strand at 4124.321 kb on + strand at 4124.322 kb on - strand at 4124.375 kb on + strand at 4124.376 kb on - strand at 4124.399 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 16.67 mM (C) remove 4,121,410 - Xcc-8004.4304.1 0.39 -0.3 4,121,410 - Xcc-8004.4304.1 0.39 -1.5 4,121,562 + Xcc-8004.4304.1 0.53 +0.6 4,121,563 - Xcc-8004.4304.1 0.53 -0.7 4,121,563 - Xcc-8004.4304.1 0.53 +1.0 4,121,665 - Xcc-8004.4304.1 0.63 -1.0 4,121,714 + Xcc-8004.4304.1 0.67 -1.2 4,121,739 + Xcc-8004.4304.1 0.69 -0.7 4,121,739 + Xcc-8004.4304.1 0.69 -0.1 4,121,740 - Xcc-8004.4304.1 0.69 -0.5 4,122,090 + -2.7 4,122,090 + -0.5 4,122,091 - -0.4 4,122,091 - -0.2 4,122,091 - -1.9 4,122,176 + -1.8 4,122,176 + -1.6 4,122,177 - -1.0 4,122,177 - +0.2 4,122,267 + -1.3 4,122,268 - +0.6 4,123,523 + -0.4 4,123,623 - -0.4 4,123,663 - +0.6 4,123,678 - -0.1 4,123,761 + -0.6 4,123,761 + +0.3 4,123,761 + -1.1 4,123,762 - +0.8 4,123,771 + -0.9 4,123,772 - -1.2 4,123,772 - +0.5 4,123,799 + -0.1 4,123,892 - Xcc-8004.4306.1 0.51 +1.0 4,123,892 - Xcc-8004.4306.1 0.51 +0.2 4,123,921 + Xcc-8004.4306.1 0.66 -0.3 4,123,969 + +0.4 4,124,032 - +0.7 4,124,032 - +0.3 4,124,139 - +1.3 4,124,241 + +0.0 4,124,241 + -1.1 4,124,303 + -0.5 4,124,304 - -0.1 4,124,304 - -0.2 4,124,304 - -0.4 4,124,304 - -0.2 4,124,321 + -2.3 4,124,322 - -0.3 4,124,375 + +0.2 4,124,376 - +0.0 4,124,399 - +1.3
Or see this region's nucleotide sequence