Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35860

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
5,920	+		BPHYT_RS35855	0.65	-3.3
5,952	-		BPHYT_RS35855	0.67	-0.1
5,952	-		BPHYT_RS35855	0.67	-1.1
6,298	-		BPHYT_RS35855	0.84	+0.0
6,386	+		BPHYT_RS35855	0.88	+2.9
6,489	+				+2.3
6,580	+				-0.6
6,581	-				-1.0
6,649	+				+0.9
6,649	+				-0.7
6,650	-				-1.7
6,650	-				-1.3
6,675	+				+0.9
6,675	+				+0.5
6,676	-				-1.3
6,741	-				+0.9
6,741	-				-2.0
6,931	+		BPHYT_RS35860	0.25	+0.1
6,932	-		BPHYT_RS35860	0.25	-0.4
7,149	+		BPHYT_RS35860	0.45	-0.1
7,149	+		BPHYT_RS35860	0.45	+1.5
7,149	+		BPHYT_RS35860	0.45	+1.2
7,150	-		BPHYT_RS35860	0.45	-0.3
7,150	-		BPHYT_RS35860	0.45	-1.6
7,185	-		BPHYT_RS35860	0.48	+0.6
7,185	-		BPHYT_RS35860	0.48	-0.3
7,185	-		BPHYT_RS35860	0.48	+0.4
7,265	+		BPHYT_RS35860	0.55	+0.4
7,712	+				-0.5
7,757	+				-1.7
7,757	+				-0.1
7,777	-				-0.3
7,944	+				+1.0
7,944	+				-0.3
7,945	-				+0.4
7,983	-				+0.1
8,036	+				+0.2
8,088	-				+3.1
8,129	+				+0.4
8,129	+				-0.9
8,130	-				-0.1
8,143	-				-0.4
8,247	+		BPHYT_RS35865	0.40	+0.0
8,247	+		BPHYT_RS35865	0.40	+0.4
8,247	+		BPHYT_RS35865	0.40	-1.7
8,248	-		BPHYT_RS35865	0.40	-0.4
8,396	+		BPHYT_RS35865	0.90	-2.2
8,397	-				-1.2
8,498	-				+0.8
8,535	-				-2.2
8,543	+				-0.1
8,616	+				-1.2
8,616	+				-0.1
8,616	+				-1.9
8,618	+				+0.5
8,618	+				-0.4
8,619	-				+0.2
8,619	-				+0.3
8,619	-				+0.3
8,619	-				-0.4
8,619	-				+0.4
8,619	-				-0.2
8,619	-				-0.6
8,622	+				-0.2
8,623	-				+0.0