Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34425

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,329,064	-				-0.1
3,329,285	+		BPHYT_RS34420	0.23	-1.7
3,329,285	+		BPHYT_RS34420	0.23	+0.2
3,329,333	+		BPHYT_RS34420	0.28	+1.3
3,329,420	+		BPHYT_RS34420	0.37	-0.9
3,329,533	-		BPHYT_RS34420	0.50	-0.1
3,329,533	-		BPHYT_RS34420	0.50	-0.9
3,329,702	+		BPHYT_RS34420	0.68	+1.3
3,329,702	+		BPHYT_RS34420	0.68	+0.3
3,330,039	-				+0.4
3,330,039	-				+0.3
3,330,268	+				+0.4
3,330,480	-		BPHYT_RS34425	0.15	+0.4
3,330,678	+		BPHYT_RS34425	0.21	-0.1
3,331,042	-		BPHYT_RS34425	0.33	+0.0
3,331,383	+		BPHYT_RS34425	0.45	+0.1
3,331,383	+		BPHYT_RS34425	0.45	+1.0
3,331,384	-		BPHYT_RS34425	0.45	-0.6
3,331,387	+		BPHYT_RS34425	0.45	-0.1
3,331,403	+		BPHYT_RS34425	0.45	+0.1
3,331,609	+		BPHYT_RS34425	0.52	-0.3
3,331,716	-		BPHYT_RS34425	0.56	-0.0
3,332,196	+		BPHYT_RS34425	0.71	-0.7
3,332,342	+		BPHYT_RS34425	0.76	-0.1
3,332,898	-				+0.7
3,333,072	-				+0.4
3,333,097	-				-0.0
3,333,178	-		BPHYT_RS34430	0.11	+1.1
3,333,841	+				+0.1
3,333,842	-				-0.4
3,334,027	+		BPHYT_RS34435	0.11	+0.6