Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30910
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,487,321 | - | BPHYT_RS30905 | 0.54 | +0.0 | |
2,487,746 | + | BPHYT_RS30905 | 0.79 | +2.1 | |
2,488,148 | - | -0.4 | |||
2,488,823 | + | BPHYT_RS30910 | 0.34 | +1.1 | |
2,489,713 | + | BPHYT_RS30910 | 0.75 | +0.3 | |
2,489,714 | - | BPHYT_RS30910 | 0.75 | -1.4 | |
2,489,794 | + | BPHYT_RS30910 | 0.79 | +1.0 | |
2,489,795 | - | BPHYT_RS30910 | 0.79 | +1.0 | |
2,490,682 | - | BPHYT_RS30915 | 0.68 | +0.8 | |
2,490,790 | + | -1.8 | |||
2,490,806 | - | +2.0 | |||
2,490,806 | - | +0.9 | |||
2,490,970 | - | -0.1 |
Or see this region's nucleotide sequence