Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26960

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
1,625,813	-		BPHYT_RS26955	0.39	-1.9
1,626,491	-				-0.4
1,626,491	-				+0.7
1,626,500	-				+0.2
1,626,554	+				-0.1
1,626,554	+				+0.1
1,626,856	+		BPHYT_RS26960	0.31	+0.6
1,627,279	+		BPHYT_RS26960	0.78	-0.6
1,627,769	+		BPHYT_RS26965	0.38	+1.5
1,628,212	+				+0.7
1,628,213	-				+0.2
1,628,225	-				-0.6
1,628,286	+		BPHYT_RS26970	0.12	+0.1
1,628,385	+		BPHYT_RS26970	0.19	+0.5
1,628,386	-		BPHYT_RS26970	0.19	-0.2
1,628,467	+		BPHYT_RS26970	0.25	+3.3