Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25525
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
1,300,370 | + | -1.9 | |||
1,300,371 | - | +0.6 | |||
1,300,460 | - | -0.2 | |||
1,300,555 | - | +0.4 | |||
1,300,565 | - | +0.7 | |||
1,300,572 | - | +0.1 | |||
1,301,057 | - | BPHYT_RS25525 | 0.72 | -0.9 | |
1,301,176 | + | -0.3 | |||
1,301,205 | - | +0.2 | |||
1,301,257 | + | +0.3 | |||
1,301,375 | + | -0.8 | |||
1,301,849 | + | -1.0 |
Or see this region's nucleotide sequence