Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23475 and BPHYT_RS23480 are separated by 339 nucleotides BPHYT_RS23480 and BPHYT_RS23485 are separated by 27 nucleotides BPHYT_RS23485 and BPHYT_RS23490 are separated by 105 nucleotides BPHYT_RS23490 and BPHYT_RS23495 are separated by 214 nucleotides
BPHYT_RS23475: BPHYT_RS23475 - luciferase, at 834,026 to 835,033
_RS23475
BPHYT_RS23480: BPHYT_RS23480 - hypothetical protein, at 835,373 to 835,894
_RS23480
BPHYT_RS23485: BPHYT_RS23485 - glyoxalase, at 835,922 to 836,344
_RS23485
BPHYT_RS23490: BPHYT_RS23490 - hypothetical protein, at 836,450 to 836,752
_RS23490
BPHYT_RS23495: BPHYT_RS23495 - thioredoxin reductase, at 836,967 to 838,700
_RS23495
Position (kb) 835
836
837 Strain fitness (log2 ratio) -2
-1
0
1 at 835.028 kb on - strand at 835.172 kb on - strand at 835.280 kb on + strand at 835.326 kb on + strand at 835.327 kb on - strand at 835.535 kb on + strand, within BPHYT_RS23480 at 835.536 kb on - strand, within BPHYT_RS23480 at 835.917 kb on - strand at 836.742 kb on - strand at 837.279 kb on + strand, within BPHYT_RS23495
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 835,028 - +0.1 835,172 - +1.4 835,280 + -1.0 835,326 + -0.9 835,327 - +0.4 835,535 + BPHYT_RS23480 0.31 -2.3 835,536 - BPHYT_RS23480 0.31 +0.8 835,917 - -0.7 836,742 - -0.9 837,279 + BPHYT_RS23495 0.18 +0.3
Or see this region's nucleotide sequence