Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22995
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
718,785 | - | BPHYT_RS22990 | 0.77 | -1.9 | |
718,899 | - | BPHYT_RS22990 | 0.86 | +0.4 | |
718,899 | - | BPHYT_RS22990 | 0.86 | -0.0 | |
719,238 | - | -1.1 | |||
719,265 | - | BPHYT_RS22995 | 0.11 | -2.3 | |
719,294 | + | BPHYT_RS22995 | 0.14 | -0.0 | |
719,550 | + | BPHYT_RS22995 | 0.37 | +0.8 | |
719,551 | - | BPHYT_RS22995 | 0.37 | +2.7 | |
719,551 | - | BPHYT_RS22995 | 0.37 | +0.4 | |
719,741 | + | BPHYT_RS22995 | 0.54 | -1.9 | |
719,741 | + | BPHYT_RS22995 | 0.54 | +1.4 | |
719,850 | + | BPHYT_RS22995 | 0.64 | +0.1 | |
720,101 | + | BPHYT_RS22995 | 0.87 | -0.7 | |
720,102 | - | BPHYT_RS22995 | 0.87 | -0.2 | |
720,973 | + | -2.4 |
Or see this region's nucleotide sequence