Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS22690 and BPHYT_RS22695 are separated by 70 nucleotides BPHYT_RS22695 and BPHYT_RS22700 are separated by 94 nucleotides
BPHYT_RS22690: BPHYT_RS22690 - D-galactonate transporter, at 645,919 to 647,295
_RS22690
BPHYT_RS22695: BPHYT_RS22695 - TetR family transcriptional regulator, at 647,366 to 648,061
_RS22695
BPHYT_RS22700: BPHYT_RS22700 - FAD-dependent oxidoreductase, at 648,156 to 649,436
_RS22700
Position (kb) 647
648
649 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 646.396 kb on + strand, within BPHYT_RS22690 at 646.483 kb on + strand, within BPHYT_RS22690 at 646.534 kb on + strand, within BPHYT_RS22690 at 646.535 kb on - strand, within BPHYT_RS22690 at 646.582 kb on + strand, within BPHYT_RS22690 at 646.583 kb on - strand, within BPHYT_RS22690 at 646.585 kb on - strand, within BPHYT_RS22690 at 646.786 kb on + strand, within BPHYT_RS22690 at 646.786 kb on + strand, within BPHYT_RS22690 at 646.806 kb on + strand, within BPHYT_RS22690 at 646.987 kb on + strand, within BPHYT_RS22690 at 646.987 kb on + strand, within BPHYT_RS22690 at 646.987 kb on + strand, within BPHYT_RS22690 at 646.987 kb on + strand, within BPHYT_RS22690 at 646.987 kb on + strand, within BPHYT_RS22690 at 646.988 kb on - strand, within BPHYT_RS22690 at 646.988 kb on - strand, within BPHYT_RS22690 at 647.473 kb on + strand, within BPHYT_RS22695 at 647.474 kb on - strand, within BPHYT_RS22695 at 647.594 kb on - strand, within BPHYT_RS22695 at 647.644 kb on - strand, within BPHYT_RS22695 at 647.717 kb on - strand, within BPHYT_RS22695 at 647.781 kb on - strand, within BPHYT_RS22695 at 647.799 kb on + strand, within BPHYT_RS22695 at 647.800 kb on - strand, within BPHYT_RS22695 at 647.800 kb on - strand, within BPHYT_RS22695 at 647.800 kb on - strand, within BPHYT_RS22695 at 647.800 kb on - strand, within BPHYT_RS22695 at 647.847 kb on + strand, within BPHYT_RS22695 at 647.848 kb on - strand, within BPHYT_RS22695 at 647.853 kb on + strand, within BPHYT_RS22695 at 647.853 kb on + strand, within BPHYT_RS22695 at 647.854 kb on - strand, within BPHYT_RS22695 at 647.980 kb on - strand, within BPHYT_RS22695 at 647.980 kb on - strand, within BPHYT_RS22695 at 648.094 kb on - strand at 648.478 kb on + strand, within BPHYT_RS22700 at 648.479 kb on - strand, within BPHYT_RS22700 at 648.590 kb on - strand, within BPHYT_RS22700 at 648.590 kb on - strand, within BPHYT_RS22700 at 648.590 kb on - strand, within BPHYT_RS22700 at 648.613 kb on + strand, within BPHYT_RS22700 at 648.613 kb on + strand, within BPHYT_RS22700 at 648.679 kb on + strand, within BPHYT_RS22700 at 648.890 kb on - strand, within BPHYT_RS22700
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 646,396 + BPHYT_RS22690 0.35 -0.9 646,483 + BPHYT_RS22690 0.41 -0.9 646,534 + BPHYT_RS22690 0.45 -0.1 646,535 - BPHYT_RS22690 0.45 +0.0 646,582 + BPHYT_RS22690 0.48 -0.6 646,583 - BPHYT_RS22690 0.48 -0.4 646,585 - BPHYT_RS22690 0.48 +0.3 646,786 + BPHYT_RS22690 0.63 +0.4 646,786 + BPHYT_RS22690 0.63 +0.3 646,806 + BPHYT_RS22690 0.64 +0.3 646,987 + BPHYT_RS22690 0.78 +0.1 646,987 + BPHYT_RS22690 0.78 +0.8 646,987 + BPHYT_RS22690 0.78 -0.7 646,987 + BPHYT_RS22690 0.78 +2.0 646,987 + BPHYT_RS22690 0.78 -0.8 646,988 - BPHYT_RS22690 0.78 +0.0 646,988 - BPHYT_RS22690 0.78 +0.6 647,473 + BPHYT_RS22695 0.15 +0.8 647,474 - BPHYT_RS22695 0.16 +0.5 647,594 - BPHYT_RS22695 0.33 -0.4 647,644 - BPHYT_RS22695 0.40 -1.0 647,717 - BPHYT_RS22695 0.50 -1.0 647,781 - BPHYT_RS22695 0.60 -0.4 647,799 + BPHYT_RS22695 0.62 -0.9 647,800 - BPHYT_RS22695 0.62 -1.4 647,800 - BPHYT_RS22695 0.62 -0.8 647,800 - BPHYT_RS22695 0.62 -1.2 647,800 - BPHYT_RS22695 0.62 +0.2 647,847 + BPHYT_RS22695 0.69 -0.6 647,848 - BPHYT_RS22695 0.69 +3.6 647,853 + BPHYT_RS22695 0.70 -0.3 647,853 + BPHYT_RS22695 0.70 -0.7 647,854 - BPHYT_RS22695 0.70 -1.8 647,980 - BPHYT_RS22695 0.88 -2.5 647,980 - BPHYT_RS22695 0.88 -2.2 648,094 - +0.9 648,478 + BPHYT_RS22700 0.25 -0.0 648,479 - BPHYT_RS22700 0.25 -0.1 648,590 - BPHYT_RS22700 0.34 -0.8 648,590 - BPHYT_RS22700 0.34 +0.2 648,590 - BPHYT_RS22700 0.34 +0.5 648,613 + BPHYT_RS22700 0.36 +0.6 648,613 + BPHYT_RS22700 0.36 +0.9 648,679 + BPHYT_RS22700 0.41 +0.2 648,890 - BPHYT_RS22700 0.57 -0.7
Or see this region's nucleotide sequence