Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20455 and BPHYT_RS20460 are separated by 227 nucleotides BPHYT_RS20460 and BPHYT_RS20465 are separated by 116 nucleotides
BPHYT_RS20455: BPHYT_RS20455 - hypothetical protein, at 151,656 to 152,333
_RS20455
BPHYT_RS20460: BPHYT_RS20460 - NmrA family transcriptional regulator, at 152,561 to 153,442
_RS20460
BPHYT_RS20465: BPHYT_RS20465 - LysR family transcriptional regulator, at 153,559 to 154,443
_RS20465
Position (kb) 152
153
154 Strain fitness (log2 ratio) -2
-1
0
1 at 151.664 kb on + strand at 151.878 kb on - strand, within BPHYT_RS20455 at 152.018 kb on - strand, within BPHYT_RS20455 at 152.018 kb on - strand, within BPHYT_RS20455 at 152.058 kb on - strand, within BPHYT_RS20455 at 152.142 kb on - strand, within BPHYT_RS20455 at 152.153 kb on + strand, within BPHYT_RS20455 at 152.167 kb on + strand, within BPHYT_RS20455 at 152.423 kb on + strand at 152.475 kb on + strand at 152.517 kb on - strand at 152.554 kb on + strand at 152.757 kb on - strand, within BPHYT_RS20460 at 152.757 kb on - strand, within BPHYT_RS20460 at 152.859 kb on + strand, within BPHYT_RS20460 at 152.859 kb on + strand, within BPHYT_RS20460 at 152.859 kb on + strand, within BPHYT_RS20460 at 152.860 kb on - strand, within BPHYT_RS20460 at 152.975 kb on - strand, within BPHYT_RS20460 at 152.980 kb on - strand, within BPHYT_RS20460 at 153.033 kb on + strand, within BPHYT_RS20460 at 153.034 kb on - strand, within BPHYT_RS20460 at 153.150 kb on + strand, within BPHYT_RS20460 at 153.150 kb on + strand, within BPHYT_RS20460 at 153.418 kb on + strand at 153.428 kb on + strand at 153.482 kb on + strand at 153.970 kb on + strand, within BPHYT_RS20465 at 154.073 kb on + strand, within BPHYT_RS20465 at 154.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 151,664 + -0.5 151,878 - BPHYT_RS20455 0.33 -0.7 152,018 - BPHYT_RS20455 0.53 +0.8 152,018 - BPHYT_RS20455 0.53 -0.5 152,058 - BPHYT_RS20455 0.59 +0.7 152,142 - BPHYT_RS20455 0.72 -2.7 152,153 + BPHYT_RS20455 0.73 -0.1 152,167 + BPHYT_RS20455 0.75 -0.1 152,423 + -0.1 152,475 + -0.5 152,517 - +0.3 152,554 + -0.3 152,757 - BPHYT_RS20460 0.22 -0.4 152,757 - BPHYT_RS20460 0.22 +1.0 152,859 + BPHYT_RS20460 0.34 +0.0 152,859 + BPHYT_RS20460 0.34 +0.0 152,859 + BPHYT_RS20460 0.34 +0.6 152,860 - BPHYT_RS20460 0.34 -0.3 152,975 - BPHYT_RS20460 0.47 +0.9 152,980 - BPHYT_RS20460 0.48 +0.1 153,033 + BPHYT_RS20460 0.54 +1.0 153,034 - BPHYT_RS20460 0.54 -0.0 153,150 + BPHYT_RS20460 0.67 +0.7 153,150 + BPHYT_RS20460 0.67 -0.4 153,418 + -0.2 153,428 + -1.0 153,482 + -0.3 153,970 + BPHYT_RS20465 0.46 +0.0 154,073 + BPHYT_RS20465 0.58 -1.3 154,361 - +0.1
Or see this region's nucleotide sequence