Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19495

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
4,385,686	-		BPHYT_RS19490	0.11	-1.0
4,385,725	+		BPHYT_RS19490	0.16	-1.3
4,386,394	+				-0.4
4,386,401	+				-0.2
4,386,448	+				-0.5
4,386,481	+				-0.5
4,386,502	-				+0.1
4,386,576	+				-0.2
4,386,576	+				+0.2
4,386,576	+				+0.4
4,386,581	+				-2.0
4,386,581	+				+0.5
4,386,582	-				+2.3
4,386,614	+				+1.0
4,386,614	+				+0.7
4,386,615	-				-2.5
4,386,806	+				-0.6
4,386,807	-				+0.3
4,386,807	-				-0.2
4,386,807	-				+0.8
4,386,997	+		BPHYT_RS19495	0.18	+0.4
4,386,998	-		BPHYT_RS19495	0.19	-0.2
4,387,118	-		BPHYT_RS19495	0.26	-2.2
4,387,379	-		BPHYT_RS19495	0.41	+0.2
4,387,452	-		BPHYT_RS19495	0.45	-1.3
4,387,454	-		BPHYT_RS19495	0.45	-0.4
4,387,454	-		BPHYT_RS19495	0.45	+0.4
4,387,633	+		BPHYT_RS19495	0.56	+0.3
4,387,634	-		BPHYT_RS19495	0.56	+0.5
4,387,703	-		BPHYT_RS19495	0.60	-0.5
4,388,047	+		BPHYT_RS19495	0.80	-0.3
4,388,071	+		BPHYT_RS19495	0.81	-3.0
4,388,072	-		BPHYT_RS19495	0.81	-1.0
4,388,201	-		BPHYT_RS19495	0.89	+0.4
4,388,233	+				+0.2
4,388,234	-				-0.0
4,388,338	+				+0.7
4,388,339	-				+0.1
4,388,386	+				-1.8
4,388,461	+				-0.8
4,388,533	+				+1.1
4,388,615	-				+1.3
4,388,639	-				-1.6
4,389,206	-		BPHYT_RS19500	0.44	+0.1
4,389,326	-		BPHYT_RS19500	0.52	+1.0
4,389,331	+		BPHYT_RS19500	0.52	-0.3
4,389,332	-		BPHYT_RS19500	0.52	-2.4
4,389,332	-		BPHYT_RS19500	0.52	+1.1