Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17140

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,882,781	+				-0.0
3,882,781	+				-0.3
3,882,782	-				+0.3
3,882,782	-				-0.6
3,882,853	+				+0.3
3,882,854	-				-0.4
3,882,854	-				+0.3
3,882,855	+				+0.3
3,882,942	-				-0.5
3,882,942	-				+0.5
3,883,194	-		BPHYT_RS17140	0.23	-1.3
3,883,376	+		BPHYT_RS17140	0.37	+0.4
3,883,618	-		BPHYT_RS17140	0.56	-0.0
3,883,618	-		BPHYT_RS17140	0.56	+0.4
3,883,731	+		BPHYT_RS17140	0.65	-0.6
3,883,731	+		BPHYT_RS17140	0.65	-0.3
3,883,883	+		BPHYT_RS17140	0.76	-0.1
3,884,051	+		BPHYT_RS17140	0.89	-0.7
3,884,129	+				-1.4
3,884,129	+				+2.4
3,884,129	+				+0.6
3,884,176	+				-0.9
3,884,176	+				+0.4
3,884,177	-				+0.7
3,884,201	+				+0.4
3,884,202	-				-0.3
3,884,379	-				+0.4
3,884,423	-				-0.3
3,884,423	-				-0.1
3,884,772	-		BPHYT_RS17145	0.25	+0.1
3,884,776	-		BPHYT_RS17145	0.25	+0.4
3,884,795	-		BPHYT_RS17145	0.27	+0.9
3,884,848	-		BPHYT_RS17145	0.31	+0.0
3,885,046	-		BPHYT_RS17145	0.46	+1.2
3,885,046	-		BPHYT_RS17145	0.46	+0.4
3,885,143	-		BPHYT_RS17145	0.54	-0.0