Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16335

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,706,294	+				-1.0
3,706,354	-				+0.2
3,706,842	-		BPHYT_RS16330	0.68	-0.2
3,706,865	+		BPHYT_RS16330	0.72	-0.2
3,707,012	+				+0.5
3,707,022	-				+0.4
3,707,022	-				-0.4
3,707,091	+				-0.3
3,707,091	+				+0.3
3,707,092	-				-0.2
3,707,092	-				-0.5
3,707,092	-				-2.6
3,707,153	-				-0.3
3,707,153	-				+2.7
3,707,286	-		BPHYT_RS16335	0.14	-1.9
3,707,900	+				+0.2
3,707,901	-				-0.5
3,707,901	-				-0.2
3,707,944	+				+0.3
3,707,945	-				-1.0
3,707,945	-				-0.6
3,708,425	-		BPHYT_RS16340	0.44	-4.1
3,708,621	-		BPHYT_RS16340	0.67	-1.2
3,708,621	-		BPHYT_RS16340	0.67	-1.5
3,708,691	+		BPHYT_RS16340	0.75	-0.7
3,708,745	+		BPHYT_RS16340	0.81	-2.6
3,708,746	-		BPHYT_RS16340	0.81	-0.7
3,708,746	-		BPHYT_RS16340	0.81	-1.6
3,708,746	-		BPHYT_RS16340	0.81	-3.3
3,708,750	-		BPHYT_RS16340	0.81	-2.7
3,708,803	-		BPHYT_RS16340	0.87	-0.2
3,708,803	-		BPHYT_RS16340	0.87	-3.4
3,708,803	-		BPHYT_RS16340	0.87	-3.9