Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15805

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,586,404	+				-0.2
3,586,405	-				+1.5
3,586,502	+				-0.1
3,586,503	-				-1.1
3,586,504	+				+0.7
3,586,504	+				-1.7
3,586,505	-				-0.2
3,586,702	+		BPHYT_RS15800	0.35	-0.3
3,586,832	+		BPHYT_RS15800	0.53	+0.0
3,586,890	-		BPHYT_RS15800	0.61	-0.8
3,586,961	-		BPHYT_RS15800	0.70	-1.0
3,586,966	+		BPHYT_RS15800	0.71	+0.7
3,586,966	+		BPHYT_RS15800	0.71	+0.6
3,586,967	-		BPHYT_RS15800	0.71	+0.4
3,587,138	-				+0.1
3,587,138	-				+0.2
3,587,138	-				-0.2
3,587,156	-				-0.6
3,587,182	+				-1.0
3,587,182	+				-0.3
3,587,230	+				+1.0
3,587,230	+				+0.1
3,587,231	-				-0.4
3,587,287	+				+0.8
3,587,287	+				+0.8
3,587,370	-				-0.4
3,587,370	-				+0.5
3,587,531	-		BPHYT_RS15805	0.18	+0.1
3,587,739	+		BPHYT_RS15805	0.33	+1.2
3,587,739	+		BPHYT_RS15805	0.33	+1.3
3,587,739	+		BPHYT_RS15805	0.33	+0.2
3,587,740	-		BPHYT_RS15805	0.33	+0.3
3,587,740	-		BPHYT_RS15805	0.33	+0.9
3,587,740	-		BPHYT_RS15805	0.33	-0.5
3,587,740	-		BPHYT_RS15805	0.33	-0.6
3,587,825	+		BPHYT_RS15805	0.39	+0.1
3,587,826	-		BPHYT_RS15805	0.40	+0.4
3,588,325	+		BPHYT_RS15805	0.75	+1.9
3,588,640	+				+0.1
3,588,641	-				-0.3
3,588,641	-				-3.9
3,588,743	-				-0.6
3,588,750	-				+0.5
3,588,752	-				+0.5
3,588,752	-				+0.4
3,588,752	-				+0.5
3,588,753	+				-0.8
3,588,862	+				-0.4
3,588,862	+				-0.4
3,588,863	-				-1.1
3,588,863	-				-0.5
3,588,868	+				-0.7
3,588,868	+				+0.3
3,588,869	-				-0.0
3,589,506	+		BPHYT_RS15810	0.57	+2.9