Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01645 and BPHYT_RS01650 are separated by 190 nucleotides BPHYT_RS01650 and BPHYT_RS01655 are separated by 94 nucleotides
BPHYT_RS01645: BPHYT_RS01645 - cobalamin biosynthesis protein CobW, at 373,591 to 374,679
_RS01645
BPHYT_RS01650: BPHYT_RS01650 - 23S rRNA methyltransferase, at 374,870 to 376,072
_RS01650
BPHYT_RS01655: BPHYT_RS01655 - tyrosine recombinase XerC, at 376,167 to 377,090
_RS01655
Position (kb) 374
375
376
377 Strain fitness (log2 ratio) -2
-1
0
1
2 at 373.981 kb on - strand, within BPHYT_RS01645 at 374.692 kb on + strand at 374.693 kb on - strand at 374.693 kb on - strand at 374.693 kb on - strand at 374.693 kb on - strand at 374.702 kb on + strand at 374.703 kb on - strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.780 kb on + strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.781 kb on - strand at 374.849 kb on + strand at 374.849 kb on + strand at 374.861 kb on + strand at 374.901 kb on + strand at 374.901 kb on + strand at 375.108 kb on + strand, within BPHYT_RS01650 at 375.109 kb on - strand, within BPHYT_RS01650 at 375.109 kb on - strand, within BPHYT_RS01650 at 375.109 kb on - strand, within BPHYT_RS01650 at 375.373 kb on - strand, within BPHYT_RS01650 at 375.447 kb on + strand, within BPHYT_RS01650 at 375.447 kb on + strand, within BPHYT_RS01650 at 375.447 kb on + strand, within BPHYT_RS01650 at 375.447 kb on + strand, within BPHYT_RS01650 at 375.447 kb on + strand, within BPHYT_RS01650 at 375.448 kb on - strand, within BPHYT_RS01650 at 375.723 kb on + strand, within BPHYT_RS01650 at 375.723 kb on + strand, within BPHYT_RS01650 at 375.723 kb on + strand, within BPHYT_RS01650 at 375.724 kb on - strand, within BPHYT_RS01650 at 375.724 kb on - strand, within BPHYT_RS01650 at 375.724 kb on - strand, within BPHYT_RS01650 at 375.724 kb on - strand, within BPHYT_RS01650 at 375.724 kb on - strand, within BPHYT_RS01650 at 375.828 kb on - strand, within BPHYT_RS01650 at 375.913 kb on - strand, within BPHYT_RS01650 at 376.009 kb on - strand at 376.009 kb on - strand at 376.060 kb on + strand at 376.205 kb on - strand at 376.238 kb on + strand at 376.240 kb on + strand at 376.241 kb on - strand at 376.241 kb on - strand at 376.241 kb on - strand at 376.256 kb on + strand at 377.021 kb on + strand at 377.021 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 373,981 - BPHYT_RS01645 0.36 -0.3 374,692 + +0.5 374,693 - +0.3 374,693 - -0.3 374,693 - -0.0 374,693 - +0.3 374,702 + -1.1 374,703 - -0.3 374,780 + +0.8 374,780 + -1.2 374,780 + +0.2 374,780 + +1.8 374,780 + -0.8 374,780 + -0.3 374,780 + -0.2 374,780 + -0.3 374,780 + -0.8 374,780 + +0.6 374,780 + +1.2 374,780 + -0.5 374,780 + +0.2 374,781 - -0.6 374,781 - -0.3 374,781 - -0.5 374,781 - -0.5 374,781 - -0.1 374,781 - +0.9 374,781 - -0.0 374,781 - -0.5 374,781 - -0.6 374,781 - +1.3 374,849 + -0.2 374,849 + -0.0 374,861 + +0.6 374,901 + -0.4 374,901 + +1.5 375,108 + BPHYT_RS01650 0.20 +1.0 375,109 - BPHYT_RS01650 0.20 +0.3 375,109 - BPHYT_RS01650 0.20 -0.3 375,109 - BPHYT_RS01650 0.20 +1.6 375,373 - BPHYT_RS01650 0.42 -0.6 375,447 + BPHYT_RS01650 0.48 -0.2 375,447 + BPHYT_RS01650 0.48 -1.2 375,447 + BPHYT_RS01650 0.48 +0.7 375,447 + BPHYT_RS01650 0.48 +0.0 375,447 + BPHYT_RS01650 0.48 -0.3 375,448 - BPHYT_RS01650 0.48 -0.1 375,723 + BPHYT_RS01650 0.71 -1.3 375,723 + BPHYT_RS01650 0.71 +0.6 375,723 + BPHYT_RS01650 0.71 +0.2 375,724 - BPHYT_RS01650 0.71 -0.3 375,724 - BPHYT_RS01650 0.71 -1.3 375,724 - BPHYT_RS01650 0.71 -0.2 375,724 - BPHYT_RS01650 0.71 +0.4 375,724 - BPHYT_RS01650 0.71 -0.7 375,828 - BPHYT_RS01650 0.80 -0.1 375,913 - BPHYT_RS01650 0.87 +0.6 376,009 - -1.4 376,009 - +0.2 376,060 + +0.1 376,205 - +1.2 376,238 + +0.2 376,240 + -0.5 376,241 - +0.2 376,241 - -1.2 376,241 - -0.9 376,256 + -2.7 377,021 + -1.4 377,021 + -1.4
Or see this region's nucleotide sequence