Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS01640

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
371,695	-		BPHYT_RS01635	0.40	+0.7
372,016	-				-0.1
372,016	-				-1.9
372,064	-				+0.7
372,147	+				+0.2
372,170	-				-0.7
372,191	+				+0.7
372,192	-				-0.4
372,295	+				+0.5
372,296	-				+0.3
372,304	+				-0.6
372,305	-				-1.1
372,371	+				+0.9
372,371	+				+0.4
372,372	-				+1.3
372,399	-				-0.2
372,399	-				-0.5
372,948	-				-1.0
372,948	-				+0.5
372,952	-				-0.8
372,952	-				+0.2
372,952	-				-0.1
373,077	-				-0.1
373,228	-				+1.2
373,272	-				+1.0
373,272	-				+0.4
373,272	-				+0.1
373,277	-				+1.1
373,277	-				+0.3
373,277	-				-0.0
373,293	-				-0.4
373,293	-				+0.1
373,320	-				+0.1
373,333	-				+0.8
373,344	-				-2.1
373,386	-				-1.5
373,386	-				-0.5
373,386	-				-0.8
373,451	-				-1.1
373,495	+				+0.8
373,496	-				-0.2
373,496	-				-1.2
373,650	+				-1.7
373,763	+		BPHYT_RS01645	0.16	-1.6
373,764	-		BPHYT_RS01645	0.16	+1.3
373,776	+		BPHYT_RS01645	0.17	-1.5
373,778	+		BPHYT_RS01645	0.17	-1.4
373,778	+		BPHYT_RS01645	0.17	-1.7
373,779	-		BPHYT_RS01645	0.17	-0.2
373,779	-		BPHYT_RS01645	0.17	-2.7
373,799	+		BPHYT_RS01645	0.19	+1.1
373,800	-		BPHYT_RS01645	0.19	-0.0
373,800	-		BPHYT_RS01645	0.19	+0.9