Experiment: BHIS with Chlorpromazine 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4417 and BT4418 are separated by 116 nucleotides BT4418 and BT4419 are separated by 13 nucleotides BT4419 and BT4420 are separated by 818 nucleotides
BT4417: BT4417 - HD superfamily hydrolase (NCBI ptt file), at 5,820,481 to 5,822,016
BT4417
BT4418: BT4418 - hypothetical protein (NCBI ptt file), at 5,822,133 to 5,822,423
BT4418
BT4419: BT4419 - hypothetical protein (NCBI ptt file), at 5,822,437 to 5,822,730
BT4419
BT4420: BT4420 - conserved hypothetical protein, with a conserved domain (NCBI ptt file), at 5,823,549 to 5,824,637
BT4420
Position (kb)
5822
5823 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5822.071 kb on - strand at 5822.758 kb on - strand at 5822.848 kb on + strand at 5822.851 kb on - strand at 5822.880 kb on - strand at 5822.959 kb on + strand at 5822.960 kb on - strand at 5822.961 kb on + strand at 5822.962 kb on - strand at 5822.962 kb on - strand at 5823.000 kb on - strand at 5823.006 kb on - strand at 5823.082 kb on - strand at 5823.120 kb on + strand at 5823.127 kb on - strand at 5823.133 kb on + strand at 5823.133 kb on + strand at 5823.133 kb on + strand at 5823.196 kb on + strand at 5823.305 kb on - strand at 5823.305 kb on - strand at 5823.322 kb on - strand at 5823.324 kb on + strand at 5823.528 kb on - strand at 5823.538 kb on - strand at 5823.606 kb on - strand at 5823.615 kb on - strand at 5823.674 kb on - strand, within BT4420 at 5823.688 kb on - strand, within BT4420
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Chlorpromazine 0.2 mM remove 5,822,071 - -1.1 5,822,758 - -2.3 5,822,848 + -2.3 5,822,851 - -1.0 5,822,880 - +1.3 5,822,959 + -1.3 5,822,960 - +1.0 5,822,961 + -2.3 5,822,962 - -1.4 5,822,962 - +2.8 5,823,000 - +0.4 5,823,006 - -2.3 5,823,082 - +1.0 5,823,120 + -1.8 5,823,127 - +0.5 5,823,133 + -1.8 5,823,133 + +1.0 5,823,133 + -0.4 5,823,196 + -0.9 5,823,305 - -1.6 5,823,305 - -3.5 5,823,322 - +2.3 5,823,324 + +2.3 5,823,528 - -2.0 5,823,538 - +2.0 5,823,606 - -1.2 5,823,615 - -1.5 5,823,674 - BT4420 0.11 +0.7 5,823,688 - BT4420 0.13 +1.0
Or see this region's nucleotide sequence