Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5735

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
6,550,883	+		Pf6N2E2_5733	0.86	+0.4
6,550,883	+		Pf6N2E2_5733	0.86	-1.0
6,550,955	+				-0.5
6,550,955	+				+0.0
6,550,956	-				-0.5
6,551,121	+				+0.5
6,551,121	+				+2.4
6,551,121	+				-0.8
6,551,121	+				+0.6
6,551,121	+				-0.8
6,551,121	+				-0.3
6,551,122	-				-0.6
6,551,122	-				-0.2
6,551,122	-				-1.0
6,551,122	-				-0.2
6,551,122	-				+0.3
6,551,122	-				+0.0
6,551,122	-				+0.2
6,551,122	-				-0.4
6,551,122	-				-0.2
6,551,122	-				+1.2
6,551,122	-				-0.3
6,551,122	-				-0.3
6,551,122	-				+0.4
6,551,317	-		Pf6N2E2_5734	0.37	-1.0
6,551,317	-		Pf6N2E2_5734	0.37	-0.7
6,551,317	-		Pf6N2E2_5734	0.37	+0.2
6,551,317	-		Pf6N2E2_5734	0.37	-1.1
6,551,356	+		Pf6N2E2_5734	0.44	+0.1
6,551,512	+		Pf6N2E2_5734	0.73	+0.3
6,551,512	+		Pf6N2E2_5734	0.73	+0.3
6,551,512	+		Pf6N2E2_5734	0.73	-0.2
6,551,512	+		Pf6N2E2_5734	0.73	+1.0
6,551,512	+		Pf6N2E2_5734	0.73	-0.2
6,551,512	+		Pf6N2E2_5734	0.73	+0.3
6,551,512	+		Pf6N2E2_5734	0.73	-0.6
6,551,512	+		Pf6N2E2_5734	0.73	+0.1
6,551,512	+		Pf6N2E2_5734	0.73	-0.3
6,551,513	-		Pf6N2E2_5734	0.73	+0.4
6,551,513	-		Pf6N2E2_5734	0.73	+0.3
6,551,513	-		Pf6N2E2_5734	0.73	+0.7
6,551,513	-		Pf6N2E2_5734	0.73	-0.2
6,551,513	-		Pf6N2E2_5734	0.73	+1.9
6,551,513	-		Pf6N2E2_5734	0.73	+0.2
6,551,513	-		Pf6N2E2_5734	0.73	+1.5
6,551,513	-		Pf6N2E2_5734	0.73	+0.1
6,551,513	-		Pf6N2E2_5734	0.73	+0.0
6,551,513	-		Pf6N2E2_5734	0.73	+0.8
6,551,513	-		Pf6N2E2_5734	0.73	+0.0
6,551,513	-		Pf6N2E2_5734	0.73	-0.2
6,551,602	+				+0.3
6,551,602	+				+1.1
6,551,602	+				+0.1
6,551,603	-				+0.0
6,551,676	+				+0.8
6,551,676	+				-0.1
6,551,676	+				+0.7
6,551,838	+				+1.7
6,551,838	+				+0.2
6,551,838	+				+0.4
6,552,008	+		Pf6N2E2_5735	0.13	+0.4
6,552,009	-		Pf6N2E2_5735	0.13	-0.9
6,552,024	+		Pf6N2E2_5735	0.14	+0.0
6,552,024	+		Pf6N2E2_5735	0.14	+0.6
6,552,025	-		Pf6N2E2_5735	0.14	+0.1
6,552,025	-		Pf6N2E2_5735	0.14	-0.6
6,552,040	+		Pf6N2E2_5735	0.15	-0.1
6,552,153	+		Pf6N2E2_5735	0.24	-0.6
6,552,154	-		Pf6N2E2_5735	0.24	+0.8
6,552,154	-		Pf6N2E2_5735	0.24	-1.4
6,552,154	-		Pf6N2E2_5735	0.24	+0.3
6,552,225	+		Pf6N2E2_5735	0.30	+0.5
6,552,228	+		Pf6N2E2_5735	0.30	+0.4
6,552,228	+		Pf6N2E2_5735	0.30	-0.1
6,552,228	+		Pf6N2E2_5735	0.30	+0.3
6,552,228	+		Pf6N2E2_5735	0.30	-0.8
6,552,228	+		Pf6N2E2_5735	0.30	+0.7
6,552,228	+		Pf6N2E2_5735	0.30	+0.5
6,552,228	+		Pf6N2E2_5735	0.30	+0.5
6,552,228	+		Pf6N2E2_5735	0.30	+0.6
6,552,228	+		Pf6N2E2_5735	0.30	+0.1
6,552,229	-		Pf6N2E2_5735	0.30	+1.3
6,552,229	-		Pf6N2E2_5735	0.30	-1.0
6,552,229	-		Pf6N2E2_5735	0.30	+0.1
6,552,229	-		Pf6N2E2_5735	0.30	-0.9
6,552,229	-		Pf6N2E2_5735	0.30	+0.1
6,552,229	-		Pf6N2E2_5735	0.30	+1.2
6,552,229	-		Pf6N2E2_5735	0.30	-0.7
6,552,229	-		Pf6N2E2_5735	0.30	+0.3
6,552,229	-		Pf6N2E2_5735	0.30	+0.7
6,552,229	-		Pf6N2E2_5735	0.30	+0.5
6,552,229	-		Pf6N2E2_5735	0.30	+0.1
6,552,246	+		Pf6N2E2_5735	0.31	+3.0
6,552,246	+		Pf6N2E2_5735	0.31	-0.8
6,552,246	+		Pf6N2E2_5735	0.31	-0.6
6,552,247	-		Pf6N2E2_5735	0.31	-0.5
6,552,247	-		Pf6N2E2_5735	0.31	-0.7
6,552,247	-		Pf6N2E2_5735	0.31	-1.0
6,552,276	+		Pf6N2E2_5735	0.33	+0.4
6,552,276	+		Pf6N2E2_5735	0.33	+0.7
6,552,277	-		Pf6N2E2_5735	0.34	+0.8
6,552,277	-		Pf6N2E2_5735	0.34	+0.9
6,552,389	+		Pf6N2E2_5735	0.42	+0.7
6,552,389	+		Pf6N2E2_5735	0.42	+0.2
6,552,390	-		Pf6N2E2_5735	0.42	-0.2
6,552,390	-		Pf6N2E2_5735	0.42	+0.8
6,552,495	+		Pf6N2E2_5735	0.50	-0.8
6,552,495	+		Pf6N2E2_5735	0.50	-0.3
6,552,495	+		Pf6N2E2_5735	0.50	+0.2
6,552,495	+		Pf6N2E2_5735	0.50	+0.4
6,552,495	+		Pf6N2E2_5735	0.50	+0.3
6,552,495	+		Pf6N2E2_5735	0.50	+0.4
6,552,495	+		Pf6N2E2_5735	0.50	+0.8
6,552,496	-		Pf6N2E2_5735	0.50	+0.4
6,552,496	-		Pf6N2E2_5735	0.50	-1.0
6,552,615	+		Pf6N2E2_5735	0.59	-0.4
6,552,615	+		Pf6N2E2_5735	0.59	-0.9
6,552,616	-		Pf6N2E2_5735	0.59	-0.6
6,552,616	-		Pf6N2E2_5735	0.59	+0.1
6,552,616	-		Pf6N2E2_5735	0.59	-0.6
6,552,616	-		Pf6N2E2_5735	0.59	+0.4
6,552,651	+		Pf6N2E2_5735	0.62	+0.1
6,552,651	+		Pf6N2E2_5735	0.62	+0.2
6,552,652	-		Pf6N2E2_5735	0.62	-0.4
6,552,652	-		Pf6N2E2_5735	0.62	+0.7
6,552,652	-		Pf6N2E2_5735	0.62	+1.4
6,552,652	-		Pf6N2E2_5735	0.62	+1.0
6,552,652	-		Pf6N2E2_5735	0.62	-1.1
6,552,652	-		Pf6N2E2_5735	0.62	+0.3
6,552,897	+		Pf6N2E2_5735	0.81	-1.3
6,552,897	+		Pf6N2E2_5735	0.81	-0.5
6,552,898	-		Pf6N2E2_5735	0.81	+1.2
6,552,898	-		Pf6N2E2_5735	0.81	-0.4
6,552,898	-		Pf6N2E2_5735	0.81	+1.7
6,552,898	-		Pf6N2E2_5735	0.81	-0.7
6,552,898	-		Pf6N2E2_5735	0.81	-0.8
6,552,898	-		Pf6N2E2_5735	0.81	-0.9
6,552,898	-		Pf6N2E2_5735	0.81	+0.0
6,553,009	+		Pf6N2E2_5735	0.89	+0.3
6,553,010	-		Pf6N2E2_5735	0.89	+0.5
6,553,159	+				-1.2
6,553,175	+				-0.1
6,553,175	+				+0.3
6,553,175	+				+0.6
6,553,175	+				+0.5
6,553,175	+				+0.8
6,553,175	+				+0.2
6,553,176	-				+0.6
6,553,176	-				-0.1
6,553,182	-				-0.6
6,553,182	-				-1.5
6,553,191	+				-0.4
6,553,191	+				+1.2
6,553,191	+				-0.7
6,553,192	-				-0.7
6,553,192	-				+0.8
6,553,257	+				-0.1
6,553,257	+				-0.3
6,553,257	+				-0.1
6,553,258	-				+0.3
6,553,258	-				-0.1
6,553,258	-				+0.3
6,553,258	-				-1.0
6,553,302	+		Pf6N2E2_5736	0.15	-0.5
6,553,302	+		Pf6N2E2_5736	0.15	-1.2
6,553,302	+		Pf6N2E2_5736	0.15	-0.6
6,553,302	+		Pf6N2E2_5736	0.15	-0.6
6,553,303	-		Pf6N2E2_5736	0.15	+0.3
6,553,303	-		Pf6N2E2_5736	0.15	+0.6
6,553,303	-		Pf6N2E2_5736	0.15	+0.1
6,553,431	+		Pf6N2E2_5736	0.37	-1.3
6,553,432	-		Pf6N2E2_5736	0.37	+0.2
6,553,432	-		Pf6N2E2_5736	0.37	+0.3
6,553,683	+		Pf6N2E2_5736	0.80	+0.2
6,553,727	-		Pf6N2E2_5736	0.88	+1.3
6,553,727	-		Pf6N2E2_5736	0.88	+0.7
6,553,798	+				-0.6
6,553,798	+				+1.0
6,553,798	+				+0.7
6,553,798	+				+0.6
6,553,798	+				+0.4
6,553,798	+				+0.4
6,553,798	+				-0.4
6,553,799	-				+0.3
6,553,799	-				+0.1
6,553,799	-				+0.4
6,553,799	-				+0.3
6,553,799	-				+0.6
6,553,799	-				-0.2
6,553,799	-				-0.2
6,553,799	-				+1.0
6,553,799	-				-0.3
6,553,799	-				-1.1
6,553,799	-				-0.3
6,553,799	-				+0.4
6,553,901	+				-1.0
6,553,902	-				+1.1
6,553,928	+				+0.2
6,553,929	-				+0.6
6,554,055	+				-0.3
6,554,055	+				-0.3
6,554,056	-				-1.2
6,554,056	-				+0.3
6,554,056	-				-1.0
6,554,056	-				-1.3
6,554,074	+				-0.4
6,554,075	-				-2.3
6,554,075	-				-1.0