Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05687

Experiment: Pimelic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C)
102,727	-		H281DRAFT_05685	0.89	+0.4
102,802	+				+0.0
102,803	-				+0.2
102,889	+				+1.4
102,890	-				+0.4
102,900	+				+0.6
102,901	-				+0.5
102,926	+				+0.1
102,927	-				-0.5
102,928	+				+0.4
102,985	+				-0.0
102,985	+				-0.1
102,986	-				-0.3
102,986	-				-0.1
103,190	+				+0.1
103,190	+				-0.2
103,190	+				-0.0
103,190	+				-0.8
103,191	-				-0.3
103,191	-				-0.1
103,191	-				+0.2
103,191	-				+0.1
103,201	-				+0.2
103,209	+				-0.9
103,210	-				-1.0
103,210	-				-0.2
103,210	-				+0.3
103,213	+				-0.1
103,214	-				-0.1
103,293	-				+0.4
103,293	-				+0.2
103,337	+				-1.5
103,337	+				-0.5
103,338	-				+0.2
103,339	+				-2.1
103,339	+				-0.4
103,416	+				-1.4
103,416	+				-0.1
103,497	+				+0.7
103,498	-				+0.4
103,520	+				-0.2
103,520	+				-0.3
103,521	-				+0.8
103,521	-				+0.1
103,539	+				-0.4
103,539	+				-0.7
103,539	+				+0.6
103,539	+				-0.1
103,539	+				+1.0
103,540	-				+0.2
103,540	-				-0.9
103,581	+				-0.1
103,581	+				+0.2
103,581	+				+0.9
103,582	-				-0.2
103,627	+				+0.1
103,628	-				+0.9
103,629	+				+0.8
103,629	+				+0.2
103,629	+				+0.2
103,630	-				+0.3
103,630	-				+1.1
103,770	+				+0.0
103,771	-				+1.3
103,771	-				+0.0
103,780	+		H281DRAFT_05687	0.10	+0.8
103,793	+		H281DRAFT_05687	0.11	+0.2
103,794	-		H281DRAFT_05687	0.11	-0.1
103,879	+		H281DRAFT_05687	0.16	+0.7
103,946	+		H281DRAFT_05687	0.21	+1.0
103,946	+		H281DRAFT_05687	0.21	+1.2
103,946	+		H281DRAFT_05687	0.21	+0.1
103,946	+		H281DRAFT_05687	0.21	-1.3
103,947	-		H281DRAFT_05687	0.21	+0.2
103,947	-		H281DRAFT_05687	0.21	-0.6
103,947	-		H281DRAFT_05687	0.21	+0.5
104,001	+		H281DRAFT_05687	0.24	+0.6
104,001	+		H281DRAFT_05687	0.24	+0.5
104,005	+		H281DRAFT_05687	0.24	+1.0
104,005	+		H281DRAFT_05687	0.24	+1.0
104,006	-		H281DRAFT_05687	0.24	+0.3
104,006	-		H281DRAFT_05687	0.24	+1.3
104,045	+		H281DRAFT_05687	0.27	+0.2
104,045	+		H281DRAFT_05687	0.27	+1.4
104,045	+		H281DRAFT_05687	0.27	+1.0
104,046	-		H281DRAFT_05687	0.27	+1.8
104,046	-		H281DRAFT_05687	0.27	+1.1
104,060	+		H281DRAFT_05687	0.28	-0.2
104,061	-		H281DRAFT_05687	0.28	+0.3
104,201	+		H281DRAFT_05687	0.37	+0.7
104,360	+		H281DRAFT_05687	0.47	+0.3
104,360	+		H281DRAFT_05687	0.47	+0.4
104,361	-		H281DRAFT_05687	0.47	+0.3
104,361	-		H281DRAFT_05687	0.47	+0.3
104,361	-		H281DRAFT_05687	0.47	+1.5
104,409	+		H281DRAFT_05687	0.50	+0.9
104,409	+		H281DRAFT_05687	0.50	-0.2
104,409	+		H281DRAFT_05687	0.50	+1.1
104,409	+		H281DRAFT_05687	0.50	-0.2
104,410	-		H281DRAFT_05687	0.50	+0.9
104,410	-		H281DRAFT_05687	0.50	-0.2
104,410	-		H281DRAFT_05687	0.50	+0.6
104,410	-		H281DRAFT_05687	0.50	+0.8
104,498	+		H281DRAFT_05687	0.55	+0.6
104,498	+		H281DRAFT_05687	0.55	+0.0
104,498	+		H281DRAFT_05687	0.55	+0.0
104,540	+		H281DRAFT_05687	0.58	+0.6
104,540	+		H281DRAFT_05687	0.58	+0.6
104,541	-		H281DRAFT_05687	0.58	+0.2
104,541	-				-0.0
104,541	-		H281DRAFT_05687	0.58	+0.4
104,541	-		H281DRAFT_05687	0.58	+0.8
104,567	+		H281DRAFT_05687	0.60	-0.2
104,568	-		H281DRAFT_05687	0.60	+0.6
104,568	-		H281DRAFT_05687	0.60	-0.1
104,568	-		H281DRAFT_05687	0.60	+0.7
104,741	+		H281DRAFT_05687	0.70	+0.7
104,742	-		H281DRAFT_05687	0.71	-0.6
104,809	+		H281DRAFT_05687	0.75	+0.4
104,867	+		H281DRAFT_05687	0.78	+0.5
104,868	-		H281DRAFT_05687	0.78	+0.4
104,930	+		H281DRAFT_05687	0.82	+0.2
104,930	+		H281DRAFT_05687	0.82	+0.2
104,930	+		H281DRAFT_05687	0.82	+0.5
104,930	+		H281DRAFT_05687	0.82	-0.1
104,931	-				+0.4
104,931	-		H281DRAFT_05687	0.82	+1.6
104,931	-		H281DRAFT_05687	0.82	+0.0
104,936	+		H281DRAFT_05687	0.83	+0.6
104,936	+		H281DRAFT_05687	0.83	+1.0
104,936	+		H281DRAFT_05687	0.83	+0.7
104,936	+		H281DRAFT_05687	0.83	+0.4
104,936	+		H281DRAFT_05687	0.83	+1.0
104,937	-		H281DRAFT_05687	0.83	+0.8
104,937	-		H281DRAFT_05687	0.83	+0.8
105,006	-		H281DRAFT_05687	0.87	-0.3
105,119	+				+2.1
105,119	+				-0.2
105,119	+				-0.2
105,119	+				+0.6
105,119	+				+0.7
105,120	-				+0.7
105,120	-				+0.6
105,120	-				+0.8
105,122	+				+0.4
105,122	+				+0.9
105,155	+				+0.4
105,155	+				-0.5
105,209	+				+1.8
105,209	+				-0.2
105,209	+				+0.2
105,210	-				+0.2
105,210	-				+0.3
105,248	-				+0.2
105,361	+				+0.2
105,361	+				+0.0
105,361	+				+0.0
105,361	+				-0.2
105,361	+				+0.7
105,361	+				-0.0
105,361	+				+0.9
105,388	+				-0.3
105,389	-				+1.1
105,418	+				-0.2
105,819	+		H281DRAFT_05688	0.61	-0.2
105,819	+		H281DRAFT_05688	0.61	-0.7
105,820	-				+0.4
105,820	-		H281DRAFT_05688	0.61	-0.1
105,820	-		H281DRAFT_05688	0.61	+0.1
105,820	-		H281DRAFT_05688	0.61	-0.9
105,907	+		H281DRAFT_05688	0.72	-1.3
105,907	+		H281DRAFT_05688	0.72	+0.5
105,907	+		H281DRAFT_05688	0.72	+0.4
105,908	-		H281DRAFT_05688	0.72	+0.7
105,908	-		H281DRAFT_05688	0.72	+0.5
105,928	+		H281DRAFT_05688	0.75	+0.1
106,117	-				-0.5
106,169	+				-0.1
106,170	-				+0.2
106,170	-				-0.4
106,170	-				+0.2
106,170	-				+0.9
106,170	-				-0.5
106,177	+				+0.2
106,177	+				+0.2
106,178	-				-0.2
106,178	-				+0.0
106,178	-				+0.6