Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05262 and H281DRAFT_05263 are separated by 64 nucleotides H281DRAFT_05263 and H281DRAFT_05264 are separated by 370 nucleotides H281DRAFT_05264 and H281DRAFT_05265 are separated by 75 nucleotides
H281DRAFT_05262: H281DRAFT_05262 - succinyl-CoA:acetate CoA-transferase, at 4,213 to 5,727
_05262
H281DRAFT_05263: H281DRAFT_05263 - Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family, at 5,792 to 6,046
_05263
H281DRAFT_05264: H281DRAFT_05264 - hypothetical protein, at 6,417 to 6,953
_05264
H281DRAFT_05265: H281DRAFT_05265 - hypothetical protein, at 7,029 to 8,192
_05265
Position (kb) 6
7 Strain fitness (log2 ratio) -1
0
1 at 5.605 kb on + strand at 5.605 kb on + strand at 5.726 kb on - strand at 5.751 kb on + strand at 5.752 kb on - strand at 6.168 kb on + strand at 6.169 kb on - strand at 6.250 kb on + strand at 6.500 kb on + strand, within H281DRAFT_05264 at 6.501 kb on - strand, within H281DRAFT_05264 at 6.571 kb on + strand, within H281DRAFT_05264 at 6.659 kb on - strand, within H281DRAFT_05264 at 6.659 kb on - strand, within H281DRAFT_05264 at 6.662 kb on + strand, within H281DRAFT_05264 at 6.663 kb on - strand, within H281DRAFT_05264 at 6.668 kb on + strand, within H281DRAFT_05264 at 6.669 kb on - strand, within H281DRAFT_05264 at 6.772 kb on + strand, within H281DRAFT_05264 at 6.951 kb on + strand at 7.126 kb on + strand at 7.126 kb on + strand at 7.129 kb on - strand at 7.502 kb on - strand, within H281DRAFT_05265 at 7.502 kb on - strand, within H281DRAFT_05265
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 5,605 + +0.6 5,605 + -0.7 5,726 - -0.3 5,751 + -0.0 5,752 - +0.7 6,168 + -0.6 6,169 - +1.4 6,250 + -0.6 6,500 + H281DRAFT_05264 0.15 -0.9 6,501 - H281DRAFT_05264 0.16 -0.1 6,571 + H281DRAFT_05264 0.29 -0.8 6,659 - H281DRAFT_05264 0.45 -0.6 6,659 - H281DRAFT_05264 0.45 +0.3 6,662 + H281DRAFT_05264 0.46 +0.2 6,663 - H281DRAFT_05264 0.46 +0.5 6,668 + H281DRAFT_05264 0.47 -0.4 6,669 - H281DRAFT_05264 0.47 -0.5 6,772 + H281DRAFT_05264 0.66 +0.1 6,951 + -0.0 7,126 + +0.2 7,126 + +0.1 7,129 - +0.5 7,502 - H281DRAFT_05265 0.41 +0.9 7,502 - H281DRAFT_05265 0.41 +0.5
Or see this region's nucleotide sequence