Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05242 and H281DRAFT_05243 are separated by 175 nucleotides H281DRAFT_05243 and H281DRAFT_05244 are separated by 230 nucleotides
H281DRAFT_05242: H281DRAFT_05242 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 209,410 to 210,960
_05242
H281DRAFT_05243: H281DRAFT_05243 - alkylhydroperoxidase AhpD family core domain-containing protein, at 211,136 to 211,573
_05243
H281DRAFT_05244: H281DRAFT_05244 - thioredoxin reductase (NADPH), at 211,804 to 212,949
_05244
Position (kb) 211
212 Strain fitness (log2 ratio) -1
0
1 at 210.731 kb on + strand, within H281DRAFT_05242 at 210.732 kb on - strand, within H281DRAFT_05242 at 210.732 kb on - strand, within H281DRAFT_05242 at 211.195 kb on + strand, within H281DRAFT_05243 at 211.196 kb on - strand, within H281DRAFT_05243 at 211.484 kb on + strand, within H281DRAFT_05243 at 211.532 kb on - strand at 211.551 kb on + strand at 211.552 kb on - strand at 211.593 kb on - strand at 211.677 kb on - strand at 211.734 kb on + strand at 211.799 kb on - strand at 211.799 kb on - strand at 212.010 kb on - strand, within H281DRAFT_05244 at 212.071 kb on + strand, within H281DRAFT_05244 at 212.076 kb on + strand, within H281DRAFT_05244 at 212.098 kb on - strand, within H281DRAFT_05244 at 212.154 kb on + strand, within H281DRAFT_05244 at 212.339 kb on - strand, within H281DRAFT_05244 at 212.466 kb on + strand, within H281DRAFT_05244 at 212.538 kb on + strand, within H281DRAFT_05244
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 210,731 + H281DRAFT_05242 0.85 +0.2 210,732 - H281DRAFT_05242 0.85 -0.3 210,732 - H281DRAFT_05242 0.85 +0.2 211,195 + H281DRAFT_05243 0.13 +0.3 211,196 - H281DRAFT_05243 0.14 +0.9 211,484 + H281DRAFT_05243 0.79 +0.5 211,532 - +1.0 211,551 + -0.3 211,552 - -0.3 211,593 - +0.8 211,677 - -0.6 211,734 + +0.6 211,799 - +1.1 211,799 - -0.2 212,010 - H281DRAFT_05244 0.18 +0.0 212,071 + H281DRAFT_05244 0.23 -0.0 212,076 + H281DRAFT_05244 0.24 +0.4 212,098 - H281DRAFT_05244 0.26 -0.3 212,154 + H281DRAFT_05244 0.31 +0.3 212,339 - H281DRAFT_05244 0.47 -0.1 212,466 + H281DRAFT_05244 0.58 +0.2 212,538 + H281DRAFT_05244 0.64 +1.3
Or see this region's nucleotide sequence