Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02314

Experiment: Pimelic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02313 and H281DRAFT_02314 are separated by 113 nucleotidesH281DRAFT_02314 and H281DRAFT_02315 are separated by 227 nucleotides H281DRAFT_02313: H281DRAFT_02313 - DNA gyrase subunit B, at 465,993 to 468,464 _02313 H281DRAFT_02314: H281DRAFT_02314 - DNA polymerase III, beta subunit, at 468,578 to 469,681 _02314 H281DRAFT_02315: H281DRAFT_02315 - chromosomal replication initiator protein DnaA, at 469,909 to 471,528 _02315 Position (kb) 468 469 470Strain fitness (log2 ratio) -1 0 1at 468.487 kb on - strandat 468.580 kb on - strandat 468.580 kb on - strandat 469.682 kb on - strandat 469.699 kb on - strandat 469.699 kb on - strandat 469.699 kb on - strandat 469.699 kb on - strandat 469.701 kb on - strandat 469.828 kb on - strandat 469.828 kb on - strandat 469.873 kb on - strandat 469.879 kb on + strandat 469.880 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pimelic (C)
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468,487 - -0.5
468,580 - +0.5
468,580 - +0.4
469,682 - +1.3
469,699 - +0.0
469,699 - +0.1
469,699 - -0.4
469,699 - -0.4
469,701 - -0.1
469,828 - +0.1
469,828 - +0.9
469,873 - -0.7
469,879 + -0.7
469,880 - +0.0

Or see this region's nucleotide sequence