Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01619 and H281DRAFT_01620 are separated by 166 nucleotides H281DRAFT_01620 and H281DRAFT_01621 are separated by 36 nucleotides H281DRAFT_01621 and H281DRAFT_01622 overlap by 1 nucleotides
H281DRAFT_01619: H281DRAFT_01619 - hypothetical protein, at 500,441 to 500,854
_01619
H281DRAFT_01620: H281DRAFT_01620 - LexA-binding, inner membrane-associated putative hydrolase, at 501,021 to 501,539
_01620
H281DRAFT_01621: H281DRAFT_01621 - transcriptional regulator, AraC family, at 501,576 to 502,424
_01621
H281DRAFT_01622: H281DRAFT_01622 - serine O-acetyltransferase, at 502,424 to 503,350
_01622
Position (kb) 501
502
503 Strain fitness (log2 ratio) -1
0
1
2 at 500.606 kb on + strand, within H281DRAFT_01619 at 500.606 kb on + strand, within H281DRAFT_01619 at 500.607 kb on - strand, within H281DRAFT_01619 at 500.607 kb on - strand, within H281DRAFT_01619 at 500.634 kb on - strand, within H281DRAFT_01619 at 500.732 kb on + strand, within H281DRAFT_01619 at 500.901 kb on - strand at 501.121 kb on - strand, within H281DRAFT_01620 at 501.121 kb on - strand, within H281DRAFT_01620 at 501.303 kb on + strand, within H281DRAFT_01620 at 501.304 kb on - strand, within H281DRAFT_01620 at 501.511 kb on + strand at 501.512 kb on - strand at 501.552 kb on + strand at 502.153 kb on + strand, within H281DRAFT_01621 at 502.274 kb on + strand, within H281DRAFT_01621 at 502.547 kb on + strand, within H281DRAFT_01622 at 502.575 kb on + strand, within H281DRAFT_01622 at 503.136 kb on + strand, within H281DRAFT_01622 at 503.140 kb on - strand, within H281DRAFT_01622 at 503.140 kb on - strand, within H281DRAFT_01622 at 503.190 kb on - strand, within H281DRAFT_01622
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 500,606 + H281DRAFT_01619 0.40 -0.5 500,606 + H281DRAFT_01619 0.40 +0.4 500,607 - H281DRAFT_01619 0.40 -0.1 500,607 - H281DRAFT_01619 0.40 +1.2 500,634 - H281DRAFT_01619 0.47 +0.3 500,732 + H281DRAFT_01619 0.70 +0.3 500,901 - -0.1 501,121 - H281DRAFT_01620 0.19 +0.2 501,121 - H281DRAFT_01620 0.19 +0.0 501,303 + H281DRAFT_01620 0.54 -1.4 501,304 - H281DRAFT_01620 0.55 +0.5 501,511 + +0.4 501,512 - +0.3 501,552 + +0.5 502,153 + H281DRAFT_01621 0.68 +0.6 502,274 + H281DRAFT_01621 0.82 +2.1 502,547 + H281DRAFT_01622 0.13 -0.0 502,575 + H281DRAFT_01622 0.16 +0.3 503,136 + H281DRAFT_01622 0.77 -0.5 503,140 - H281DRAFT_01622 0.77 +0.3 503,140 - H281DRAFT_01622 0.77 -0.1 503,190 - H281DRAFT_01622 0.83 -0.2
Or see this region's nucleotide sequence