Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01609 and H281DRAFT_01610 are separated by 166 nucleotides H281DRAFT_01610 and H281DRAFT_01611 are separated by 27 nucleotides
H281DRAFT_01609: H281DRAFT_01609 - drug resistance transporter, EmrB/QacA subfamily, at 489,958 to 491,361
_01609
H281DRAFT_01610: H281DRAFT_01610 - Choline kinase, at 491,528 to 492,292
_01610
H281DRAFT_01611: H281DRAFT_01611 - putative membrane protein, at 492,320 to 493,339
_01611
Position (kb) 491
492
493 Strain fitness (log2 ratio) -1
0
1 at 490.640 kb on + strand, within H281DRAFT_01609 at 490.640 kb on + strand, within H281DRAFT_01609 at 490.685 kb on - strand, within H281DRAFT_01609 at 490.886 kb on + strand, within H281DRAFT_01609 at 490.887 kb on - strand, within H281DRAFT_01609 at 490.887 kb on - strand, within H281DRAFT_01609 at 490.887 kb on - strand, within H281DRAFT_01609 at 490.952 kb on + strand, within H281DRAFT_01609 at 490.953 kb on - strand, within H281DRAFT_01609 at 490.953 kb on - strand, within H281DRAFT_01609 at 490.966 kb on + strand, within H281DRAFT_01609 at 490.967 kb on - strand, within H281DRAFT_01609 at 491.204 kb on + strand, within H281DRAFT_01609 at 491.205 kb on - strand, within H281DRAFT_01609 at 491.393 kb on - strand at 491.394 kb on + strand at 491.395 kb on - strand at 491.395 kb on - strand at 491.395 kb on - strand at 491.395 kb on - strand at 491.395 kb on - strand at 491.721 kb on + strand, within H281DRAFT_01610 at 491.722 kb on - strand, within H281DRAFT_01610 at 491.722 kb on - strand, within H281DRAFT_01610 at 491.722 kb on - strand, within H281DRAFT_01610 at 492.048 kb on + strand, within H281DRAFT_01610 at 492.153 kb on - strand, within H281DRAFT_01610 at 492.492 kb on + strand, within H281DRAFT_01611
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 490,640 + H281DRAFT_01609 0.49 +1.3 490,640 + H281DRAFT_01609 0.49 +0.1 490,685 - H281DRAFT_01609 0.52 +0.6 490,886 + H281DRAFT_01609 0.66 -0.4 490,887 - H281DRAFT_01609 0.66 +0.0 490,887 - H281DRAFT_01609 0.66 +0.1 490,887 - H281DRAFT_01609 0.66 +0.9 490,952 + H281DRAFT_01609 0.71 -0.3 490,953 - H281DRAFT_01609 0.71 -0.1 490,953 - H281DRAFT_01609 0.71 +0.2 490,966 + H281DRAFT_01609 0.72 -0.3 490,967 - H281DRAFT_01609 0.72 +0.8 491,204 + H281DRAFT_01609 0.89 -0.1 491,205 - H281DRAFT_01609 0.89 -0.1 491,393 - +0.9 491,394 + +0.1 491,395 - -1.2 491,395 - -0.3 491,395 - -1.3 491,395 - +0.6 491,395 - -0.4 491,721 + H281DRAFT_01610 0.25 +0.5 491,722 - H281DRAFT_01610 0.25 -1.2 491,722 - H281DRAFT_01610 0.25 +1.4 491,722 - H281DRAFT_01610 0.25 +1.4 492,048 + H281DRAFT_01610 0.68 +0.7 492,153 - H281DRAFT_01610 0.82 +0.6 492,492 + H281DRAFT_01611 0.17 +0.4
Or see this region's nucleotide sequence