Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_523 and HP15_524 are separated by 56 nucleotides HP15_524 and HP15_525 are separated by 147 nucleotides
HP15_523: HP15_523 - two component, sigma54 specific, transcriptional regulator, Fis family, at 536,554 to 537,942
_523
HP15_524: HP15_524 - signal transduction histidine kinase, nitrogen specific, NtrB, at 537,999 to 539,654
_524
HP15_525: HP15_525 - NAD+ synthetase, at 539,802 to 541,418
_525
Position (kb) 537
538
539
540 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 537.031 kb on + strand, within HP15_523 at 537.116 kb on - strand, within HP15_523 at 537.143 kb on + strand, within HP15_523 at 537.149 kb on - strand, within HP15_523 at 537.238 kb on + strand, within HP15_523 at 537.480 kb on + strand, within HP15_523 at 537.501 kb on - strand, within HP15_523 at 537.534 kb on + strand, within HP15_523 at 537.542 kb on - strand, within HP15_523 at 537.574 kb on - strand, within HP15_523 at 537.574 kb on - strand, within HP15_523 at 537.624 kb on - strand, within HP15_523 at 537.703 kb on - strand, within HP15_523 at 537.703 kb on - strand, within HP15_523 at 537.719 kb on + strand, within HP15_523 at 537.719 kb on + strand, within HP15_523 at 537.745 kb on + strand, within HP15_523 at 537.748 kb on - strand, within HP15_523 at 537.753 kb on - strand, within HP15_523 at 537.758 kb on - strand, within HP15_523 at 537.850 kb on - strand at 537.914 kb on + strand at 537.919 kb on + strand at 537.927 kb on - strand at 538.008 kb on - strand at 538.097 kb on + strand at 538.213 kb on + strand, within HP15_524 at 538.218 kb on + strand, within HP15_524 at 538.270 kb on + strand, within HP15_524 at 538.285 kb on + strand, within HP15_524 at 538.285 kb on + strand, within HP15_524 at 538.293 kb on - strand, within HP15_524 at 538.323 kb on - strand, within HP15_524 at 538.461 kb on + strand, within HP15_524 at 538.504 kb on - strand, within HP15_524 at 538.607 kb on - strand, within HP15_524 at 538.607 kb on - strand, within HP15_524 at 538.690 kb on + strand, within HP15_524 at 538.766 kb on + strand, within HP15_524 at 539.178 kb on + strand, within HP15_524 at 539.186 kb on - strand, within HP15_524 at 539.200 kb on + strand, within HP15_524 at 539.239 kb on - strand, within HP15_524 at 539.310 kb on + strand, within HP15_524 at 539.372 kb on + strand, within HP15_524 at 539.415 kb on - strand, within HP15_524 at 539.464 kb on + strand, within HP15_524 at 539.536 kb on - strand at 539.563 kb on + strand at 539.606 kb on + strand at 539.606 kb on + strand at 539.689 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 537,031 + HP15_523 0.34 -3.8 537,116 - HP15_523 0.40 -3.1 537,143 + HP15_523 0.42 -2.7 537,149 - HP15_523 0.43 -3.3 537,238 + HP15_523 0.49 -2.6 537,480 + HP15_523 0.67 -4.1 537,501 - HP15_523 0.68 -4.2 537,534 + HP15_523 0.71 -3.6 537,542 - HP15_523 0.71 -3.8 537,574 - HP15_523 0.73 -2.5 537,574 - HP15_523 0.73 -4.2 537,624 - HP15_523 0.77 -3.3 537,703 - HP15_523 0.83 -4.5 537,703 - HP15_523 0.83 -3.4 537,719 + HP15_523 0.84 -2.2 537,719 + HP15_523 0.84 -3.0 537,745 + HP15_523 0.86 -4.9 537,748 - HP15_523 0.86 -2.4 537,753 - HP15_523 0.86 -2.9 537,758 - HP15_523 0.87 -3.5 537,850 - -3.4 537,914 + -3.1 537,919 + -0.1 537,927 - -3.6 538,008 - +2.8 538,097 + -2.1 538,213 + HP15_524 0.13 -2.6 538,218 + HP15_524 0.13 -3.2 538,270 + HP15_524 0.16 -4.1 538,285 + HP15_524 0.17 -3.2 538,285 + HP15_524 0.17 -2.6 538,293 - HP15_524 0.18 -3.8 538,323 - HP15_524 0.20 -2.6 538,461 + HP15_524 0.28 -2.6 538,504 - HP15_524 0.30 -3.6 538,607 - HP15_524 0.37 -4.0 538,607 - HP15_524 0.37 -3.6 538,690 + HP15_524 0.42 -2.1 538,766 + HP15_524 0.46 -4.3 539,178 + HP15_524 0.71 -3.7 539,186 - HP15_524 0.72 -4.5 539,200 + HP15_524 0.73 -2.4 539,239 - HP15_524 0.75 -3.4 539,310 + HP15_524 0.79 -2.6 539,372 + HP15_524 0.83 -3.8 539,415 - HP15_524 0.86 -3.1 539,464 + HP15_524 0.88 -1.1 539,536 - -2.9 539,563 + +1.1 539,606 + -2.1 539,606 + -3.3 539,689 - -0.8
Or see this region's nucleotide sequence