Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3243 and HP15_3244 are separated by 116 nucleotides HP15_3244 and HP15_3245 are separated by 9 nucleotides HP15_3245 and HP15_3246 are separated by 61 nucleotides HP15_3246 and HP15_3247 are separated by 145 nucleotides
HP15_3243: HP15_3243 - appr-1-p processing domain protein, at 3,397,493 to 3,398,026
_3243
HP15_3244: HP15_3244 - uncharacterized conserved protein UCP029033, periplasmic protein, at 3,398,143 to 3,398,853
_3244
HP15_3245: HP15_3245 - hyaluronidase, at 3,398,863 to 3,399,987
_3245
HP15_3246: HP15_3246 - ATPase, at 3,400,049 to 3,400,507
_3246
HP15_3247: HP15_3247 - twin-arginine translocation pathway signal, at 3,400,653 to 3,401,729
_3247
Position (kb)
3398
3399
3400 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3398.075 kb on + strand at 3398.076 kb on - strand at 3398.199 kb on + strand at 3398.212 kb on - strand at 3398.217 kb on - strand, within HP15_3244 at 3398.262 kb on - strand, within HP15_3244 at 3398.312 kb on + strand, within HP15_3244 at 3398.335 kb on + strand, within HP15_3244 at 3398.392 kb on - strand, within HP15_3244 at 3398.445 kb on + strand, within HP15_3244 at 3398.450 kb on + strand, within HP15_3244 at 3398.475 kb on + strand, within HP15_3244 at 3398.521 kb on - strand, within HP15_3244 at 3398.521 kb on - strand, within HP15_3244 at 3398.542 kb on + strand, within HP15_3244 at 3398.555 kb on - strand, within HP15_3244 at 3398.576 kb on - strand, within HP15_3244 at 3398.590 kb on + strand, within HP15_3244 at 3398.661 kb on + strand, within HP15_3244 at 3398.676 kb on - strand, within HP15_3244 at 3398.791 kb on - strand at 3399.124 kb on - strand, within HP15_3245 at 3400.124 kb on - strand, within HP15_3246 at 3400.161 kb on - strand, within HP15_3246 at 3400.163 kb on + strand, within HP15_3246 at 3400.198 kb on + strand, within HP15_3246 at 3400.287 kb on + strand, within HP15_3246 at 3400.288 kb on + strand, within HP15_3246 at 3400.288 kb on + strand, within HP15_3246 at 3400.300 kb on + strand, within HP15_3246 at 3400.308 kb on - strand, within HP15_3246 at 3400.369 kb on + strand, within HP15_3246 at 3400.454 kb on - strand, within HP15_3246 at 3400.456 kb on + strand, within HP15_3246 at 3400.456 kb on + strand, within HP15_3246 at 3400.470 kb on - strand at 3400.623 kb on - strand at 3400.661 kb on - strand at 3400.663 kb on + strand at 3400.709 kb on - strand at 3400.898 kb on + strand, within HP15_3247 at 3400.906 kb on - strand, within HP15_3247 at 3400.911 kb on - strand, within HP15_3247 at 3400.921 kb on - strand, within HP15_3247 at 3400.935 kb on + strand, within HP15_3247
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 3,398,075 + +1.4 3,398,076 - -1.3 3,398,199 + -2.2 3,398,212 - +0.7 3,398,217 - HP15_3244 0.10 +0.2 3,398,262 - HP15_3244 0.17 +0.2 3,398,312 + HP15_3244 0.24 -0.8 3,398,335 + HP15_3244 0.27 -0.0 3,398,392 - HP15_3244 0.35 +0.0 3,398,445 + HP15_3244 0.42 -0.7 3,398,450 + HP15_3244 0.43 -0.1 3,398,475 + HP15_3244 0.47 +0.5 3,398,521 - HP15_3244 0.53 -0.2 3,398,521 - HP15_3244 0.53 -0.3 3,398,542 + HP15_3244 0.56 -0.1 3,398,555 - HP15_3244 0.58 -0.2 3,398,576 - HP15_3244 0.61 -1.8 3,398,590 + HP15_3244 0.63 -1.9 3,398,661 + HP15_3244 0.73 +0.7 3,398,676 - HP15_3244 0.75 +0.2 3,398,791 - +1.1 3,399,124 - HP15_3245 0.23 -2.8 3,400,124 - HP15_3246 0.16 -1.0 3,400,161 - HP15_3246 0.24 +0.7 3,400,163 + HP15_3246 0.25 -0.6 3,400,198 + HP15_3246 0.32 +0.3 3,400,287 + HP15_3246 0.52 +0.4 3,400,288 + HP15_3246 0.52 +0.7 3,400,288 + HP15_3246 0.52 +0.4 3,400,300 + HP15_3246 0.55 -0.7 3,400,308 - HP15_3246 0.56 +0.2 3,400,369 + HP15_3246 0.70 -0.6 3,400,454 - HP15_3246 0.88 +1.6 3,400,456 + HP15_3246 0.89 +1.2 3,400,456 + HP15_3246 0.89 +0.7 3,400,470 - -0.5 3,400,623 - -1.3 3,400,661 - -2.0 3,400,663 + +0.5 3,400,709 - -1.5 3,400,898 + HP15_3247 0.23 +0.3 3,400,906 - HP15_3247 0.23 -0.0 3,400,911 - HP15_3247 0.24 -1.6 3,400,921 - HP15_3247 0.25 +0.3 3,400,935 + HP15_3247 0.26 -0.1
Or see this region's nucleotide sequence