Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2519 and HP15_2520 are separated by 101 nucleotides HP15_2520 and HP15_2521 are separated by 34 nucleotides HP15_2521 and HP15_2522 are separated by 126 nucleotides
HP15_2519: HP15_2519 - DNA topoisomerase IV subunit A, at 2,660,077 to 2,662,386
_2519
HP15_2520: HP15_2520 - hypothetical protein, at 2,662,488 to 2,662,631
_2520
HP15_2521: HP15_2521 - conserved hypothetical protein, membrane, at 2,662,666 to 2,662,908
_2521
HP15_2522: HP15_2522 - methyl-accepting chemotaxis sensory transducer, at 2,663,035 to 2,664,672
_2522
Position (kb)
2662
2663 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2662.546 kb on + strand, within HP15_2520 at 2662.554 kb on - strand, within HP15_2520 at 2662.595 kb on + strand, within HP15_2520 at 2662.609 kb on + strand, within HP15_2520 at 2662.621 kb on + strand at 2662.989 kb on + strand at 2663.025 kb on + strand at 2663.127 kb on + strand at 2663.273 kb on - strand, within HP15_2522 at 2663.323 kb on + strand, within HP15_2522 at 2663.323 kb on + strand, within HP15_2522 at 2663.331 kb on - strand, within HP15_2522 at 2663.331 kb on - strand, within HP15_2522 at 2663.331 kb on - strand, within HP15_2522 at 2663.331 kb on - strand, within HP15_2522 at 2663.459 kb on + strand, within HP15_2522 at 2663.511 kb on - strand, within HP15_2522 at 2663.535 kb on + strand, within HP15_2522 at 2663.560 kb on + strand, within HP15_2522 at 2663.575 kb on + strand, within HP15_2522 at 2663.590 kb on - strand, within HP15_2522 at 2663.601 kb on - strand, within HP15_2522 at 2663.601 kb on - strand, within HP15_2522 at 2663.638 kb on + strand, within HP15_2522 at 2663.648 kb on + strand, within HP15_2522 at 2663.648 kb on + strand, within HP15_2522 at 2663.656 kb on - strand, within HP15_2522 at 2663.720 kb on + strand, within HP15_2522 at 2663.728 kb on - strand, within HP15_2522 at 2663.730 kb on + strand, within HP15_2522 at 2663.738 kb on - strand, within HP15_2522 at 2663.738 kb on - strand, within HP15_2522 at 2663.820 kb on + strand, within HP15_2522 at 2663.881 kb on + strand, within HP15_2522
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,662,546 + HP15_2520 0.40 +1.7 2,662,554 - HP15_2520 0.46 -1.8 2,662,595 + HP15_2520 0.74 +0.6 2,662,609 + HP15_2520 0.84 -1.8 2,662,621 + -1.1 2,662,989 + +0.4 2,663,025 + +0.2 2,663,127 + +1.4 2,663,273 - HP15_2522 0.15 +0.2 2,663,323 + HP15_2522 0.18 +0.5 2,663,323 + HP15_2522 0.18 +2.2 2,663,331 - HP15_2522 0.18 -1.2 2,663,331 - HP15_2522 0.18 +0.8 2,663,331 - HP15_2522 0.18 +0.3 2,663,331 - HP15_2522 0.18 +0.4 2,663,459 + HP15_2522 0.26 +0.2 2,663,511 - HP15_2522 0.29 +0.6 2,663,535 + HP15_2522 0.31 +0.3 2,663,560 + HP15_2522 0.32 -0.1 2,663,575 + HP15_2522 0.33 +0.5 2,663,590 - HP15_2522 0.34 +0.5 2,663,601 - HP15_2522 0.35 +0.8 2,663,601 - HP15_2522 0.35 +0.3 2,663,638 + HP15_2522 0.37 +0.2 2,663,648 + HP15_2522 0.37 -1.6 2,663,648 + HP15_2522 0.37 +0.6 2,663,656 - HP15_2522 0.38 -1.3 2,663,720 + HP15_2522 0.42 +0.3 2,663,728 - HP15_2522 0.42 -0.6 2,663,730 + HP15_2522 0.42 +0.3 2,663,738 - HP15_2522 0.43 -1.5 2,663,738 - HP15_2522 0.43 +0.5 2,663,820 + HP15_2522 0.48 +0.6 2,663,881 + HP15_2522 0.52 +0.1
Or see this region's nucleotide sequence