Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2505 and HP15_2506 overlap by 6 nucleotides HP15_2506 and HP15_2507 are separated by 253 nucleotides HP15_2507 and HP15_2508 are separated by 15 nucleotides HP15_2508 and HP15_2509 are separated by 161 nucleotides
HP15_2505: HP15_2505 - iron-sulfur cluster binding protein, at 2,646,155 to 2,647,234
_2505
HP15_2506: HP15_2506 - oligoribonuclease, at 2,647,229 to 2,647,771
_2506
HP15_2507: HP15_2507 - ribosome-associated GTPase, at 2,648,025 to 2,649,080
_2507
HP15_2508: HP15_2508 - OmpA/MotB domain protein, at 2,649,096 to 2,649,836
_2508
HP15_2509: HP15_2509 - hypothetical protein, at 2,649,998 to 2,650,111
_2509
Position (kb)
2648
2649
2650 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2647.029 kb on + strand, within HP15_2505 at 2647.052 kb on - strand, within HP15_2505 at 2647.091 kb on + strand, within HP15_2505 at 2647.105 kb on - strand, within HP15_2505 at 2647.120 kb on + strand, within HP15_2505 at 2647.201 kb on + strand at 2647.219 kb on - strand at 2647.227 kb on + strand at 2647.234 kb on - strand at 2647.937 kb on - strand at 2647.974 kb on + strand at 2648.144 kb on + strand, within HP15_2507 at 2648.157 kb on - strand, within HP15_2507 at 2649.311 kb on - strand, within HP15_2508 at 2649.339 kb on - strand, within HP15_2508 at 2649.368 kb on + strand, within HP15_2508 at 2649.403 kb on + strand, within HP15_2508 at 2649.474 kb on - strand, within HP15_2508 at 2649.487 kb on - strand, within HP15_2508 at 2649.514 kb on + strand, within HP15_2508 at 2649.577 kb on + strand, within HP15_2508 at 2649.602 kb on - strand, within HP15_2508 at 2649.649 kb on + strand, within HP15_2508 at 2649.667 kb on + strand, within HP15_2508 at 2649.667 kb on + strand, within HP15_2508 at 2649.733 kb on - strand, within HP15_2508 at 2649.830 kb on + strand at 2650.068 kb on + strand, within HP15_2509 at 2650.076 kb on - strand, within HP15_2509
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,647,029 + HP15_2505 0.81 +1.2 2,647,052 - HP15_2505 0.83 -1.4 2,647,091 + HP15_2505 0.87 -1.1 2,647,105 - HP15_2505 0.88 -2.5 2,647,120 + HP15_2505 0.89 -1.4 2,647,201 + -1.0 2,647,219 - +0.9 2,647,227 + +0.9 2,647,234 - +0.3 2,647,937 - -1.4 2,647,974 + -2.8 2,648,144 + HP15_2507 0.11 -2.6 2,648,157 - HP15_2507 0.12 -2.2 2,649,311 - HP15_2508 0.29 -1.4 2,649,339 - HP15_2508 0.33 -0.6 2,649,368 + HP15_2508 0.37 +0.4 2,649,403 + HP15_2508 0.41 -0.5 2,649,474 - HP15_2508 0.51 -1.2 2,649,487 - HP15_2508 0.53 -1.5 2,649,514 + HP15_2508 0.56 -2.4 2,649,577 + HP15_2508 0.65 -1.4 2,649,602 - HP15_2508 0.68 -1.4 2,649,649 + HP15_2508 0.75 +0.7 2,649,667 + HP15_2508 0.77 -0.6 2,649,667 + HP15_2508 0.77 -0.1 2,649,733 - HP15_2508 0.86 -2.6 2,649,830 + -0.8 2,650,068 + HP15_2509 0.61 -1.2 2,650,076 - HP15_2509 0.68 -1.9
Or see this region's nucleotide sequence