Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2505 and HP15_2506 overlap by 6 nucleotides HP15_2506 and HP15_2507 are separated by 253 nucleotides
HP15_2505: HP15_2505 - iron-sulfur cluster binding protein, at 2,646,155 to 2,647,234
_2505
HP15_2506: HP15_2506 - oligoribonuclease, at 2,647,229 to 2,647,771
_2506
HP15_2507: HP15_2507 - ribosome-associated GTPase, at 2,648,025 to 2,649,080
_2507
Position (kb)
2647
2648 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2646.275 kb on + strand, within HP15_2505 at 2646.359 kb on + strand, within HP15_2505 at 2646.397 kb on + strand, within HP15_2505 at 2646.405 kb on - strand, within HP15_2505 at 2646.478 kb on + strand, within HP15_2505 at 2646.483 kb on + strand, within HP15_2505 at 2646.619 kb on + strand, within HP15_2505 at 2646.623 kb on - strand, within HP15_2505 at 2646.640 kb on - strand, within HP15_2505 at 2646.640 kb on - strand, within HP15_2505 at 2646.739 kb on - strand, within HP15_2505 at 2646.765 kb on + strand, within HP15_2505 at 2646.765 kb on + strand, within HP15_2505 at 2646.774 kb on + strand, within HP15_2505 at 2646.782 kb on - strand, within HP15_2505 at 2646.782 kb on - strand, within HP15_2505 at 2646.782 kb on - strand, within HP15_2505 at 2646.782 kb on - strand, within HP15_2505 at 2646.865 kb on + strand, within HP15_2505 at 2646.939 kb on - strand, within HP15_2505 at 2646.944 kb on - strand, within HP15_2505 at 2646.992 kb on + strand, within HP15_2505 at 2647.029 kb on + strand, within HP15_2505 at 2647.052 kb on - strand, within HP15_2505 at 2647.091 kb on + strand, within HP15_2505 at 2647.105 kb on - strand, within HP15_2505 at 2647.120 kb on + strand, within HP15_2505 at 2647.201 kb on + strand at 2647.219 kb on - strand at 2647.227 kb on + strand at 2647.234 kb on - strand at 2647.937 kb on - strand at 2647.974 kb on + strand at 2648.144 kb on + strand, within HP15_2507 at 2648.157 kb on - strand, within HP15_2507
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,646,275 + HP15_2505 0.11 -0.6 2,646,359 + HP15_2505 0.19 -1.6 2,646,397 + HP15_2505 0.22 -1.3 2,646,405 - HP15_2505 0.23 +0.4 2,646,478 + HP15_2505 0.30 -1.0 2,646,483 + HP15_2505 0.30 +0.9 2,646,619 + HP15_2505 0.43 -0.2 2,646,623 - HP15_2505 0.43 +0.4 2,646,640 - HP15_2505 0.45 -0.2 2,646,640 - HP15_2505 0.45 -4.1 2,646,739 - HP15_2505 0.54 -0.3 2,646,765 + HP15_2505 0.56 -0.2 2,646,765 + HP15_2505 0.56 -0.0 2,646,774 + HP15_2505 0.57 -0.4 2,646,782 - HP15_2505 0.58 -1.2 2,646,782 - HP15_2505 0.58 -1.5 2,646,782 - HP15_2505 0.58 +0.3 2,646,782 - HP15_2505 0.58 -2.3 2,646,865 + HP15_2505 0.66 +0.2 2,646,939 - HP15_2505 0.73 +0.3 2,646,944 - HP15_2505 0.73 +0.1 2,646,992 + HP15_2505 0.78 -0.6 2,647,029 + HP15_2505 0.81 +1.2 2,647,052 - HP15_2505 0.83 -1.4 2,647,091 + HP15_2505 0.87 -1.1 2,647,105 - HP15_2505 0.88 -2.5 2,647,120 + HP15_2505 0.89 -1.4 2,647,201 + -1.0 2,647,219 - +0.9 2,647,227 + +0.9 2,647,234 - +0.3 2,647,937 - -1.4 2,647,974 + -2.8 2,648,144 + HP15_2507 0.11 -2.6 2,648,157 - HP15_2507 0.12 -2.2
Or see this region's nucleotide sequence