Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2463 and HP15_2464 are separated by 412 nucleotides HP15_2464 and HP15_2465 are separated by 162 nucleotides
HP15_2463: HP15_2463 - sulfate adenylyltransferase, large subunit, at 2,601,752 to 2,603,410
_2463
HP15_2464: HP15_2464 - nucleoid-associated protein NdpA, at 2,603,823 to 2,604,839
_2464
HP15_2465: HP15_2465 - tRNA guanosine-2'-O-methyltransferase, at 2,605,002 to 2,605,739
_2465
Position (kb)
2603
2604
2605 Strain fitness (log2 ratio)
-2
-1
0
1 at 2602.824 kb on + strand, within HP15_2463 at 2602.831 kb on - strand, within HP15_2463 at 2602.831 kb on - strand, within HP15_2463 at 2602.831 kb on - strand, within HP15_2463 at 2602.856 kb on + strand, within HP15_2463 at 2603.031 kb on + strand, within HP15_2463 at 2603.039 kb on - strand, within HP15_2463 at 2603.157 kb on - strand, within HP15_2463 at 2603.183 kb on - strand, within HP15_2463 at 2603.183 kb on - strand, within HP15_2463 at 2603.191 kb on - strand, within HP15_2463 at 2603.202 kb on - strand, within HP15_2463 at 2603.303 kb on - strand at 2603.418 kb on + strand at 2603.553 kb on + strand at 2603.613 kb on + strand at 2603.621 kb on - strand at 2603.623 kb on + strand at 2603.777 kb on + strand at 2603.779 kb on - strand at 2603.792 kb on - strand at 2603.792 kb on - strand at 2603.792 kb on - strand at 2603.847 kb on + strand at 2603.861 kb on + strand at 2603.931 kb on + strand, within HP15_2464 at 2603.965 kb on - strand, within HP15_2464 at 2604.000 kb on + strand, within HP15_2464 at 2604.110 kb on - strand, within HP15_2464 at 2604.123 kb on - strand, within HP15_2464 at 2604.328 kb on + strand, within HP15_2464 at 2604.432 kb on - strand, within HP15_2464 at 2604.452 kb on - strand, within HP15_2464 at 2604.708 kb on + strand, within HP15_2464 at 2604.726 kb on - strand, within HP15_2464 at 2604.793 kb on - strand at 2604.884 kb on + strand at 2604.884 kb on + strand at 2604.892 kb on - strand at 2605.031 kb on + strand at 2605.091 kb on - strand, within HP15_2465 at 2605.091 kb on - strand, within HP15_2465 at 2605.156 kb on + strand, within HP15_2465 at 2605.258 kb on + strand, within HP15_2465 at 2605.266 kb on - strand, within HP15_2465 at 2605.281 kb on + strand, within HP15_2465 at 2605.373 kb on - strand, within HP15_2465 at 2605.388 kb on + strand, within HP15_2465 at 2605.416 kb on - strand, within HP15_2465 at 2605.446 kb on + strand, within HP15_2465 at 2605.463 kb on + strand, within HP15_2465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 2,602,824 + HP15_2463 0.65 +0.7 2,602,831 - HP15_2463 0.65 -0.1 2,602,831 - HP15_2463 0.65 -1.9 2,602,831 - HP15_2463 0.65 -1.4 2,602,856 + HP15_2463 0.67 +0.3 2,603,031 + HP15_2463 0.77 +1.1 2,603,039 - HP15_2463 0.78 -1.1 2,603,157 - HP15_2463 0.85 +0.5 2,603,183 - HP15_2463 0.86 +1.1 2,603,183 - HP15_2463 0.86 +0.5 2,603,191 - HP15_2463 0.87 +0.0 2,603,202 - HP15_2463 0.87 +0.8 2,603,303 - -1.0 2,603,418 + +0.6 2,603,553 + -0.6 2,603,613 + -2.1 2,603,621 - +0.1 2,603,623 + +1.6 2,603,777 + -1.3 2,603,779 - -1.6 2,603,792 - +0.9 2,603,792 - -1.1 2,603,792 - +0.7 2,603,847 + +0.2 2,603,861 + +0.5 2,603,931 + HP15_2464 0.11 +0.7 2,603,965 - HP15_2464 0.14 -1.2 2,604,000 + HP15_2464 0.17 -1.5 2,604,110 - HP15_2464 0.28 +0.9 2,604,123 - HP15_2464 0.29 +1.2 2,604,328 + HP15_2464 0.50 +1.5 2,604,432 - HP15_2464 0.60 -1.7 2,604,452 - HP15_2464 0.62 +1.4 2,604,708 + HP15_2464 0.87 +0.2 2,604,726 - HP15_2464 0.89 +0.7 2,604,793 - -0.3 2,604,884 + -0.2 2,604,884 + +0.4 2,604,892 - -0.2 2,605,031 + -0.0 2,605,091 - HP15_2465 0.12 -1.0 2,605,091 - HP15_2465 0.12 -0.3 2,605,156 + HP15_2465 0.21 +0.2 2,605,258 + HP15_2465 0.35 +0.5 2,605,266 - HP15_2465 0.36 -1.5 2,605,281 + HP15_2465 0.38 -0.2 2,605,373 - HP15_2465 0.50 -1.2 2,605,388 + HP15_2465 0.52 -2.2 2,605,416 - HP15_2465 0.56 -0.2 2,605,446 + HP15_2465 0.60 +0.5 2,605,463 + HP15_2465 0.62 -0.2
Or see this region's nucleotide sequence