Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3186

Experiment: Formate/Acetate-Sulfate (30/30-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (30/30-30 mM)
3,345,152	+	roO	DVU3185	0.44	-0.2
3,345,161	+	roO	DVU3185	0.45	-2.4
3,345,169	-	roO	DVU3185	0.46	-0.2
3,345,171	+	roO	DVU3185	0.46	-0.2
3,345,179	-	roO	DVU3185	0.47	-0.1
3,345,315	-	roO	DVU3185	0.58	-0.5
3,345,439	+	roO	DVU3185	0.68	-0.4
3,345,447	-	roO	DVU3185	0.69	-0.1
3,345,477	+	roO	DVU3185	0.71	-0.2
3,345,514	-	roO	DVU3185	0.74	-0.2
3,345,772	+				-0.2
3,345,839	+				+0.0
3,346,101	+				+0.1
3,346,145	-				-0.6
3,346,163	+				-2.0
3,346,261	-		DVU3186	0.14	-0.1
3,346,317	-		DVU3186	0.20	-0.6
3,346,339	-		DVU3186	0.23	-0.1
3,346,475	+		DVU3186	0.40	-0.1
3,346,509	+		DVU3186	0.44	-0.0
3,346,562	+		DVU3186	0.50	-0.5
3,346,624	-		DVU3186	0.58	-1.8
3,346,679	+		DVU3186	0.64	-0.8
3,346,679	+		DVU3186	0.64	+0.2
3,346,680	+		DVU3186	0.64	-0.0
3,346,680	+		DVU3186	0.64	-0.8
3,346,680	+		DVU3186	0.64	-0.4
3,346,680	+		DVU3186	0.64	-1.3
3,346,688	-		DVU3186	0.65	-0.5
3,346,688	-		DVU3186	0.65	-0.0
3,346,688	-		DVU3186	0.65	-1.1
3,346,714	+		DVU3186	0.69	-1.0
3,346,715	+		DVU3186	0.69	-0.4
3,346,722	-		DVU3186	0.70	+0.1
3,346,769	+		DVU3186	0.75	-1.5
3,346,775	-		DVU3186	0.76	-0.8
3,346,801	-		DVU3186	0.79	+0.3
3,346,815	-		DVU3186	0.81	-0.4
3,346,815	-		DVU3186	0.81	-0.7
3,346,852	-		DVU3186	0.85	-0.6
3,346,873	+		DVU3186	0.88	-0.0
3,346,901	-				+0.1
3,346,990	-				+0.2
3,347,107	-	hup-4	DVU3187	0.21	+0.4
3,347,127	+	hup-4	DVU3187	0.28	+1.2
3,347,171	-	hup-4	DVU3187	0.43	-0.4
3,347,186	-	hup-4	DVU3187	0.49	-2.1
3,347,252	-	hup-4	DVU3187	0.72	-0.1
3,347,253	+	hup-4	DVU3187	0.72	-0.2
3,347,261	-	hup-4	DVU3187	0.75	-0.1
3,347,261	-	hup-4	DVU3187	0.75	+0.1
3,347,301	+	hup-4	DVU3187	0.89	+0.3
3,347,320	-				-0.2
3,347,480	+				-1.1
3,347,486	+				-1.0
3,347,493	-				+0.0
3,347,567	+		DVU3188	0.12	+0.2
3,347,576	-		DVU3188	0.13	+0.9
3,347,578	+		DVU3188	0.13	-0.6
3,347,593	-		DVU3188	0.15	+0.1
3,347,696	+		DVU3188	0.30	-0.1
3,347,714	-		DVU3188	0.32	+0.2
3,347,714	-		DVU3188	0.32	-0.4
3,347,714	-		DVU3188	0.32	-0.2
3,347,758	+		DVU3188	0.38	+0.0
3,347,766	-		DVU3188	0.39	+0.9
3,347,801	+		DVU3188	0.44	-0.3
3,347,815	-		DVU3188	0.46	+2.0
3,347,891	+		DVU3188	0.57	+0.3
3,347,899	-		DVU3188	0.58	-1.0
3,347,910	-		DVU3188	0.59	+0.2