Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1647

Experiment: Formate/Acetate-Sulfate (30/30-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (30/30-30 mM)
1,725,027	+		DVU1645	0.57	-1.1
1,725,244	+				-0.1
1,725,365	+				+0.1
1,725,373	-				-1.2
1,725,389	+	arsC	DVU1646	0.13	+0.2
1,725,457	+	arsC	DVU1646	0.28	-0.3
1,725,459	+	arsC	DVU1646	0.29	-0.1
1,725,631	-	arsC	DVU1646	0.67	+1.0
1,725,719	+	arsC	DVU1646	0.87	+0.6
1,725,856	+				+0.3
1,725,861	-				+0.6
1,725,919	+				-0.2
1,725,951	-				+0.1
1,725,966	+				-0.3
1,725,974	-				-0.6
1,726,029	-				-0.2
1,726,243	+	lysA-1	DVU1647	0.20	+0.1
1,726,246	-	lysA-1	DVU1647	0.20	-0.2
1,726,260	-	lysA-1	DVU1647	0.21	+0.0
1,726,417	-	lysA-1	DVU1647	0.34	+0.1
1,726,459	+	lysA-1	DVU1647	0.37	+0.1
1,726,542	-	lysA-1	DVU1647	0.44	-0.1
1,726,631	-	lysA-1	DVU1647	0.51	-0.3
1,726,699	-	lysA-1	DVU1647	0.56	+0.1
1,726,705	-	lysA-1	DVU1647	0.57	-0.1
1,726,757	+	lysA-1	DVU1647	0.61	+0.6
1,726,774	+	lysA-1	DVU1647	0.62	+0.1
1,726,785	+	lysA-1	DVU1647	0.63	-0.2
1,726,810	-	lysA-1	DVU1647	0.65	-0.1
1,726,845	-	lysA-1	DVU1647	0.68	-0.2
1,726,934	+	lysA-1	DVU1647	0.75	+0.3
1,727,003	+	lysA-1	DVU1647	0.81	-0.3
1,727,022	-	lysA-1	DVU1647	0.82	-0.2
1,727,162	+				-0.1
1,727,227	+				-1.2
1,727,259	+				-0.0
1,727,297	+				-0.9
1,727,376	+		DVU1648	0.14	-0.6
1,727,390	+		DVU1648	0.17	-0.9
1,727,457	-		DVU1648	0.33	-0.3
1,727,558	-		DVU1648	0.56	+0.1
1,727,644	-		DVU1648	0.75	+0.1
1,727,705	-		DVU1648	0.89	-0.2
1,727,756	-				-0.1
1,727,848	-				-0.3
1,727,857	+				-2.1
1,727,865	-				+0.3
1,727,869	+				-1.1
1,727,891	+				+1.2
1,727,937	-				+0.3
1,728,075	-	mutS	DVU1649	0.12	-0.7
1,728,082	+	mutS	DVU1649	0.13	+0.1
1,728,153	-	mutS	DVU1649	0.15	+0.3
1,728,161	-	mutS	DVU1649	0.16	+0.2
1,728,174	-	mutS	DVU1649	0.16	-0.1