Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4230

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
4,918,882	+		Pf6N2E2_4228	0.90	+1.0
4,918,883	-		Pf6N2E2_4228	0.90	-3.5
4,918,883	-		Pf6N2E2_4228	0.90	+0.0
4,918,883	-		Pf6N2E2_4228	0.90	-3.0
4,918,942	+				+0.4
4,918,942	+				-0.0
4,918,943	-				-0.5
4,918,943	-				-0.9
4,918,943	-				+1.0
4,918,943	-				-0.8
4,919,106	+				-2.8
4,919,106	+				+1.9
4,919,106	+				+1.3
4,919,107	-				+1.0
4,919,147	+				+0.1
4,919,147	+				+0.9
4,919,148	-				-0.5
4,919,148	-				-0.4
4,919,173	+				-3.0
4,919,173	+				+2.1
4,919,174	-				-0.8
4,919,174	-				+1.3
4,919,303	+				-1.2
4,919,341	+		Pf6N2E2_4229	0.12	-0.2
4,919,341	+		Pf6N2E2_4229	0.12	-2.7
4,919,342	-		Pf6N2E2_4229	0.12	+1.5
4,919,342	-		Pf6N2E2_4229	0.12	-1.2
4,919,362	+		Pf6N2E2_4229	0.15	-1.3
4,919,362	+		Pf6N2E2_4229	0.15	-0.5
4,919,363	-		Pf6N2E2_4229	0.15	-0.8
4,919,363	-		Pf6N2E2_4229	0.15	-1.0
4,919,363	-		Pf6N2E2_4229	0.15	-0.8
4,919,363	-		Pf6N2E2_4229	0.15	-2.4
4,919,363	-		Pf6N2E2_4229	0.15	+1.1
4,919,368	+		Pf6N2E2_4229	0.16	+0.4
4,919,368	+		Pf6N2E2_4229	0.16	-1.5
4,919,368	+		Pf6N2E2_4229	0.16	+1.0
4,919,368	+		Pf6N2E2_4229	0.16	-0.6
4,919,413	+		Pf6N2E2_4229	0.24	-0.5
4,919,413	+		Pf6N2E2_4229	0.24	+0.7
4,919,414	-		Pf6N2E2_4229	0.24	-1.2
4,919,414	-		Pf6N2E2_4229	0.24	+1.4
4,919,446	+		Pf6N2E2_4229	0.29	-3.3
4,919,446	+		Pf6N2E2_4229	0.29	-0.8
4,919,446	+		Pf6N2E2_4229	0.29	-0.5
4,919,447	-		Pf6N2E2_4229	0.29	+0.6
4,919,447	-		Pf6N2E2_4229	0.29	-3.3
4,919,528	+		Pf6N2E2_4229	0.43	-1.7
4,919,528	+		Pf6N2E2_4229	0.43	+2.2
4,919,529	-		Pf6N2E2_4229	0.43	-0.6
4,919,605	+		Pf6N2E2_4229	0.56	+0.2
4,919,607	+		Pf6N2E2_4229	0.56	-2.6
4,919,607	+		Pf6N2E2_4229	0.56	+1.0
4,919,607	+		Pf6N2E2_4229	0.56	+0.8
4,919,607	+		Pf6N2E2_4229	0.56	-1.9
4,919,607	+		Pf6N2E2_4229	0.56	+0.3
4,919,607	+		Pf6N2E2_4229	0.56	+0.4
4,919,607	+		Pf6N2E2_4229	0.56	-0.3
4,919,607	+		Pf6N2E2_4229	0.56	+1.1
4,919,607	+		Pf6N2E2_4229	0.56	-0.7
4,919,607	+		Pf6N2E2_4229	0.56	-2.2
4,919,607	+		Pf6N2E2_4229	0.56	-0.8
4,919,607	+		Pf6N2E2_4229	0.56	-1.7
4,919,608	-		Pf6N2E2_4229	0.56	-2.3
4,919,608	-		Pf6N2E2_4229	0.56	-0.5
4,919,608	-		Pf6N2E2_4229	0.56	+0.9
4,919,608	-		Pf6N2E2_4229	0.56	+0.5
4,919,608	-		Pf6N2E2_4229	0.56	-1.4
4,919,608	-		Pf6N2E2_4229	0.56	-1.5
4,919,608	-		Pf6N2E2_4229	0.56	-0.6
4,919,608	-		Pf6N2E2_4229	0.56	-2.2
4,919,608	-		Pf6N2E2_4229	0.56	-1.0
4,919,693	-		Pf6N2E2_4229	0.71	-0.8
4,919,919	+				-0.5
4,919,919	+				+2.5
4,919,919	+				-1.4
4,919,919	+				+0.6
4,920,206	+		Pf6N2E2_4230	0.38	+0.6
4,920,206	+		Pf6N2E2_4230	0.38	+1.2
4,920,207	-		Pf6N2E2_4230	0.38	-0.1
4,920,207	-		Pf6N2E2_4230	0.38	+1.2
4,920,207	-		Pf6N2E2_4230	0.38	+2.4
4,920,207	-		Pf6N2E2_4230	0.38	+1.9
4,920,402	+		Pf6N2E2_4230	0.57	+0.3
4,920,402	+		Pf6N2E2_4230	0.57	+0.4
4,920,402	+		Pf6N2E2_4230	0.57	-0.0
4,920,402	+		Pf6N2E2_4230	0.57	+1.3
4,920,402	+		Pf6N2E2_4230	0.57	+1.3
4,920,402	+		Pf6N2E2_4230	0.57	+1.2
4,920,402	+		Pf6N2E2_4230	0.57	+0.3
4,920,403	-		Pf6N2E2_4230	0.57	-1.0
4,920,403	-		Pf6N2E2_4230	0.57	-0.4
4,920,403	-		Pf6N2E2_4230	0.57	-2.3
4,920,403	-		Pf6N2E2_4230	0.57	+0.6
4,920,403	-		Pf6N2E2_4230	0.57	+0.1
4,920,403	-		Pf6N2E2_4230	0.57	+0.2
4,920,403	-		Pf6N2E2_4230	0.57	-1.7
4,920,403	-		Pf6N2E2_4230	0.57	+0.9
4,920,403	-		Pf6N2E2_4230	0.57	-3.0
4,920,518	+		Pf6N2E2_4230	0.69	-0.6
4,920,519	-		Pf6N2E2_4230	0.69	-0.8
4,920,519	-		Pf6N2E2_4230	0.69	+1.5
4,920,519	-		Pf6N2E2_4230	0.69	+1.1
4,920,735	+				-0.4
4,920,735	+				-0.0
4,920,736	-				+1.1
4,920,736	-				-0.4
4,920,736	-				+1.3
4,920,801	-				-0.2
4,920,817	-				+0.0
4,920,861	-				-0.4
4,920,867	-				+0.6
4,920,873	+				+1.1
4,920,873	+				+0.3
4,920,874	-				+0.0
4,920,874	-				-1.2
4,920,893	+				-0.8
4,920,915	-				+0.6
4,920,915	-				-0.2
4,920,915	-				+1.8
4,920,915	-				+0.0
4,921,074	+				-2.2
4,921,074	+				-0.1
4,921,074	+				-0.7
4,921,074	+				-1.5
4,921,074	+				+0.8
4,921,074	+				-0.6
4,921,074	+				+0.0
4,921,075	-				+1.0
4,921,075	-				+2.4
4,921,075	-				-1.2
4,921,075	-				+0.3
4,921,075	-				-0.6
4,921,091	-				+1.0
4,921,200	+				+0.7
4,921,200	+				-3.8
4,921,322	+		Pf6N2E2_4231	0.22	-3.5
4,921,322	+		Pf6N2E2_4231	0.22	+0.5
4,921,323	-		Pf6N2E2_4231	0.22	+1.6
4,921,323	-		Pf6N2E2_4231	0.22	+1.2
4,921,363	+		Pf6N2E2_4231	0.26	-1.2
4,921,363	+		Pf6N2E2_4231	0.26	-1.2
4,921,366	+		Pf6N2E2_4231	0.27	-2.0
4,921,366	+		Pf6N2E2_4231	0.27	-1.6
4,921,366	+		Pf6N2E2_4231	0.27	-1.3
4,921,367	-		Pf6N2E2_4231	0.27	+0.1
4,921,386	+		Pf6N2E2_4231	0.29	-2.3
4,921,386	+		Pf6N2E2_4231	0.29	-0.3
4,921,386	+		Pf6N2E2_4231	0.29	+1.0
4,921,386	+		Pf6N2E2_4231	0.29	+1.0
4,921,386	+		Pf6N2E2_4231	0.29	-0.0
4,921,386	+		Pf6N2E2_4231	0.29	-1.8
4,921,386	+		Pf6N2E2_4231	0.29	-0.8
4,921,386	+		Pf6N2E2_4231	0.29	+0.8
4,921,386	+		Pf6N2E2_4231	0.29	+1.0
4,921,386	+		Pf6N2E2_4231	0.29	+1.0
4,921,386	+		Pf6N2E2_4231	0.29	-0.1
4,921,387	-		Pf6N2E2_4231	0.29	-2.0
4,921,387	-		Pf6N2E2_4231	0.29	-1.3
4,921,387	-		Pf6N2E2_4231	0.29	+0.9
4,921,387	-		Pf6N2E2_4231	0.29	-0.1
4,921,387	-		Pf6N2E2_4231	0.29	+1.3
4,921,387	-		Pf6N2E2_4231	0.29	-2.8
4,921,387	-		Pf6N2E2_4231	0.29	+0.8
4,921,387	-		Pf6N2E2_4231	0.29	+0.6
4,921,387	-		Pf6N2E2_4231	0.29	-1.8
4,921,387	-		Pf6N2E2_4231	0.29	-0.0
4,921,387	-		Pf6N2E2_4231	0.29	-1.1
4,921,392	+		Pf6N2E2_4231	0.29	+0.1
4,921,392	+		Pf6N2E2_4231	0.29	+0.3
4,921,392	+		Pf6N2E2_4231	0.29	-0.1
4,921,392	+		Pf6N2E2_4231	0.29	-1.0
4,921,392	+		Pf6N2E2_4231	0.29	+0.7
4,921,392	+		Pf6N2E2_4231	0.29	+0.5
4,921,392	+		Pf6N2E2_4231	0.29	+0.4
4,921,392	+		Pf6N2E2_4231	0.29	-0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.4
4,921,392	+		Pf6N2E2_4231	0.29	+0.2
4,921,392	+		Pf6N2E2_4231	0.29	+0.6
4,921,392	+		Pf6N2E2_4231	0.29	-2.6
4,921,392	+		Pf6N2E2_4231	0.29	+0.1
4,921,392	+		Pf6N2E2_4231	0.29	-4.2
4,921,393	-		Pf6N2E2_4231	0.29	+0.5
4,921,393	-		Pf6N2E2_4231	0.29	+0.3
4,921,393	-		Pf6N2E2_4231	0.29	-1.0
4,921,435	-		Pf6N2E2_4231	0.34	+1.4
4,921,608	+		Pf6N2E2_4231	0.53	+1.5
4,921,617	+		Pf6N2E2_4231	0.54	+0.7
4,921,617	+		Pf6N2E2_4231	0.54	+0.0
4,921,618	-		Pf6N2E2_4231	0.54	+0.2
4,921,703	-		Pf6N2E2_4231	0.63	+1.7
4,921,815	+		Pf6N2E2_4231	0.75	+0.5
4,921,815	+		Pf6N2E2_4231	0.75	+1.1
4,921,816	-		Pf6N2E2_4231	0.75	-1.6
4,921,816	-		Pf6N2E2_4231	0.75	+1.7