Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3207

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
3,704,854	+		Pf6N2E2_3205	0.75	+0.3
3,704,854	+		Pf6N2E2_3205	0.75	+1.1
3,704,854	+		Pf6N2E2_3205	0.75	-0.4
3,704,855	-		Pf6N2E2_3205	0.75	-1.5
3,704,855	-		Pf6N2E2_3205	0.75	+0.0
3,704,940	+				+0.3
3,704,940	+				-1.2
3,704,941	-				+0.8
3,704,954	+				+0.7
3,704,955	-				-0.2
3,704,955	-				-0.3
3,704,955	-				+2.1
3,704,958	+				-0.7
3,704,958	+				+1.2
3,704,959	-				-0.2
3,704,959	-				+0.6
3,704,967	+				-0.1
3,704,967	+				-1.6
3,705,011	+				-3.1
3,705,011	+				-0.9
3,705,012	-				+0.7
3,705,012	-				+1.3
3,705,012	-				+0.9
3,705,032	+				+1.9
3,705,032	+				+0.5
3,705,033	-				+0.2
3,705,033	-				-0.6
3,705,033	-				+0.5
3,705,033	-				-0.1
3,705,033	-				-1.1
3,705,044	-				-0.6
3,705,075	-		Pf6N2E2_3206	0.16	-3.1
3,705,075	-		Pf6N2E2_3206	0.16	+0.4
3,705,286	+				-2.3
3,705,330	-				-0.1
3,705,330	-				-0.5
3,705,330	-				+1.8
3,705,428	+				-0.4
3,705,428	+				-0.1
3,705,429	-				-3.6
3,705,432	+				-2.4
3,705,432	+				+1.8
3,705,432	+				+2.1
3,705,432	+				-2.9
3,705,432	+				-2.7
3,705,432	+				+1.0
3,705,433	-				-1.6
3,705,433	-				+1.6
3,705,433	-				-0.5
3,705,433	-				-3.5
3,705,433	-				-1.6
3,705,433	-				-0.7
3,705,433	-				+2.3
3,705,433	-				-1.6
3,705,433	-				+1.3
3,705,433	-				-0.1
3,705,433	-				-0.9
3,705,433	-				+2.0
3,705,434	+				-2.3
3,705,473	-				+0.1
3,705,473	-				-1.1
3,705,534	-				-0.7
3,705,534	-				-2.8
3,705,596	+				-1.4
3,705,596	+				+1.1
3,705,597	-				-0.0
3,705,606	-				+1.1
3,705,660	-		Pf6N2E2_3207	0.10	-1.4
3,705,690	-		Pf6N2E2_3207	0.13	+1.9
3,705,690	-		Pf6N2E2_3207	0.13	-0.1
3,705,809	+		Pf6N2E2_3207	0.23	+0.6
3,705,837	-		Pf6N2E2_3207	0.25	+0.0
3,705,926	-		Pf6N2E2_3207	0.33	+1.3
3,705,964	+		Pf6N2E2_3207	0.36	-0.6
3,706,059	-		Pf6N2E2_3207	0.44	+0.5
3,706,074	+		Pf6N2E2_3207	0.45	+1.0
3,706,074	+		Pf6N2E2_3207	0.45	+1.1
3,706,074	+		Pf6N2E2_3207	0.45	+0.7
3,706,074	+		Pf6N2E2_3207	0.45	-1.5
3,706,075	-		Pf6N2E2_3207	0.45	+1.0
3,706,075	-		Pf6N2E2_3207	0.45	+1.9
3,706,075	-		Pf6N2E2_3207	0.45	-0.6
3,706,157	+		Pf6N2E2_3207	0.52	+1.8
3,706,157	+		Pf6N2E2_3207	0.52	+0.4
3,706,158	-		Pf6N2E2_3207	0.52	-0.3
3,706,330	+		Pf6N2E2_3207	0.66	-0.6
3,706,331	-		Pf6N2E2_3207	0.67	+0.4
3,706,386	-		Pf6N2E2_3207	0.71	+0.7
3,706,386	-		Pf6N2E2_3207	0.71	+0.7
3,706,397	+		Pf6N2E2_3207	0.72	-3.0
3,706,398	-		Pf6N2E2_3207	0.72	+0.6
3,706,448	+		Pf6N2E2_3207	0.76	+1.7
3,706,448	+		Pf6N2E2_3207	0.76	+0.1
3,706,449	-		Pf6N2E2_3207	0.76	+0.3
3,706,477	+		Pf6N2E2_3207	0.79	-2.3
3,706,477	+		Pf6N2E2_3207	0.79	+0.2
3,706,477	+		Pf6N2E2_3207	0.79	+1.3
3,706,477	+		Pf6N2E2_3207	0.79	-0.1
3,706,477	+		Pf6N2E2_3207	0.79	+0.7
3,706,477	+		Pf6N2E2_3207	0.79	+1.3
3,706,477	+		Pf6N2E2_3207	0.79	+1.3
3,706,477	+		Pf6N2E2_3207	0.79	+0.3
3,706,477	+		Pf6N2E2_3207	0.79	+1.3
3,706,477	+		Pf6N2E2_3207	0.79	-2.2
3,706,477	+		Pf6N2E2_3207	0.79	-1.1
3,706,477	+		Pf6N2E2_3207	0.79	+0.5
3,706,478	-		Pf6N2E2_3207	0.79	+0.0
3,706,478	-		Pf6N2E2_3207	0.79	+0.5
3,706,478	-		Pf6N2E2_3207	0.79	-0.9
3,706,478	-		Pf6N2E2_3207	0.79	+0.9
3,706,478	-		Pf6N2E2_3207	0.79	-2.9
3,706,478	-		Pf6N2E2_3207	0.79	+1.0
3,706,478	-		Pf6N2E2_3207	0.79	+0.2
3,706,478	-		Pf6N2E2_3207	0.79	+1.4
3,706,478	-		Pf6N2E2_3207	0.79	+0.7
3,706,478	-		Pf6N2E2_3207	0.79	+1.4
3,706,478	-		Pf6N2E2_3207	0.79	-0.1
3,706,478	-		Pf6N2E2_3207	0.79	+1.1
3,706,478	-		Pf6N2E2_3207	0.79	-1.0
3,706,481	+		Pf6N2E2_3207	0.79	-0.1
3,706,481	+		Pf6N2E2_3207	0.79	+1.9
3,706,481	+		Pf6N2E2_3207	0.79	+1.0
3,706,481	+		Pf6N2E2_3207	0.79	+1.4
3,706,481	+		Pf6N2E2_3207	0.79	-0.5
3,706,482	-		Pf6N2E2_3207	0.79	+1.0
3,706,482	-		Pf6N2E2_3207	0.79	-1.1
3,706,482	-		Pf6N2E2_3207	0.79	-0.6
3,706,484	+		Pf6N2E2_3207	0.79	+0.4
3,706,484	+		Pf6N2E2_3207	0.79	+2.0
3,706,484	+		Pf6N2E2_3207	0.79	-1.7
3,706,484	+		Pf6N2E2_3207	0.79	+0.5
3,706,485	-		Pf6N2E2_3207	0.79	-1.1
3,706,485	-		Pf6N2E2_3207	0.79	+0.9
3,706,485	-		Pf6N2E2_3207	0.79	-1.9
3,706,549	-		Pf6N2E2_3207	0.85	+0.7
3,706,565	-		Pf6N2E2_3207	0.86	-0.9
3,706,588	+		Pf6N2E2_3207	0.88	-0.5
3,706,630	-				-1.1
3,706,638	-				-0.1
3,706,638	-				-0.7
3,706,719	+				-0.3
3,706,720	-				-0.9
3,706,758	+		Pf6N2E2_3208	0.14	+0.2
3,706,759	-		Pf6N2E2_3208	0.14	-0.3
3,706,769	+		Pf6N2E2_3208	0.19	+0.8
3,706,769	+		Pf6N2E2_3208	0.19	+2.0
3,706,770	-		Pf6N2E2_3208	0.19	+0.4
3,706,772	+		Pf6N2E2_3208	0.20	-0.0
3,706,773	-		Pf6N2E2_3208	0.20	-0.1
3,706,798	+		Pf6N2E2_3208	0.31	+1.8
3,706,798	+		Pf6N2E2_3208	0.31	+0.9
3,706,799	-		Pf6N2E2_3208	0.32	+0.6
3,706,799	-		Pf6N2E2_3208	0.32	+1.5
3,706,799	-		Pf6N2E2_3208	0.32	+0.6
3,706,799	-		Pf6N2E2_3208	0.32	+1.1
3,706,799	-		Pf6N2E2_3208	0.32	-0.9
3,706,821	+		Pf6N2E2_3208	0.41	+1.4
3,706,821	+		Pf6N2E2_3208	0.41	+0.3
3,706,821	+		Pf6N2E2_3208	0.41	-1.1
3,706,889	+		Pf6N2E2_3208	0.71	-0.6
3,706,889	+		Pf6N2E2_3208	0.71	-1.5
3,706,889	+		Pf6N2E2_3208	0.71	+0.2
3,706,889	+		Pf6N2E2_3208	0.71	-1.2
3,706,890	-		Pf6N2E2_3208	0.71	-3.1
3,706,890	-		Pf6N2E2_3208	0.71	-2.1
3,706,890	-		Pf6N2E2_3208	0.71	+1.2
3,706,890	-		Pf6N2E2_3208	0.71	-1.1
3,706,979	-				+0.5
3,706,979	-				-1.3
3,707,002	-				-0.4
3,707,002	-				+0.6
3,707,007	+				+0.5
3,707,007	+				+1.0
3,707,008	-				+1.4
3,707,010	-				-1.0
3,707,227	-				-0.9
3,707,262	-				-1.8
3,707,278	+				-2.9
3,707,282	-				-0.4
3,707,282	-				+1.0
3,707,357	+				+1.5
3,707,358	-				-2.3
3,707,358	-				+0.6
3,707,358	-				+0.4
3,707,358	-				-0.5
3,707,363	+				-0.1
3,707,363	+				-1.6
3,707,363	+				-1.5
3,707,363	+				+0.4
3,707,364	-				+1.1
3,707,381	+				+0.0
3,707,382	-				-0.3
3,707,393	+				-1.0
3,707,399	+				+0.9
3,707,399	+				-0.5
3,707,399	+				+1.2
3,707,399	+				-1.2
3,707,400	-				-0.9
3,707,400	-				+1.7
3,707,420	-				-2.3
3,707,420	-				+0.3
3,707,436	+				-1.1
3,707,451	+				+0.6
3,707,451	+				+0.6
3,707,451	+				+2.2
3,707,451	+				-0.6
3,707,452	-				+1.9
3,707,452	-				-0.3
3,707,452	-				-1.7
3,707,452	-				+0.5
3,707,457	+				-0.6
3,707,458	-				+1.1
3,707,458	-				-2.0
3,707,482	+				-0.0
3,707,483	-				+0.1
3,707,572	+				-1.7
3,707,572	+				+0.7
3,707,573	-				-0.3
3,707,590	-				-0.6
3,707,669	+				+0.3
3,707,669	+				-3.5
3,707,670	-				+0.7
3,707,675	+				-2.2
3,707,675	+				-2.3
3,707,675	+				-2.3
3,707,675	+				-1.6
3,707,676	-				+0.6
3,707,676	-				-2.5