Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4663

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
5,391,562	-				+0.4
5,391,702	+		Pf6N2E2_4662	0.44	+0.3
5,391,767	-		Pf6N2E2_4662	0.64	-0.9
5,391,844	+		Pf6N2E2_4662	0.88	+0.3
5,391,844	+		Pf6N2E2_4662	0.88	+0.2
5,391,844	+		Pf6N2E2_4662	0.88	-1.5
5,391,844	+		Pf6N2E2_4662	0.88	-0.8
5,391,844	+		Pf6N2E2_4662	0.88	+0.4
5,391,880	+				+0.7
5,391,880	+				-0.5
5,391,880	+				-0.3
5,391,880	+				-0.8
5,391,880	+				-0.2
5,391,880	+				-0.6
5,391,880	+				+0.8
5,391,880	+				+0.5
5,391,880	+				+0.1
5,391,881	-				+1.7
5,391,881	-				-2.2
5,391,881	-				-1.0
5,391,881	-				-0.6
5,391,881	-				-0.2
5,391,938	+				+1.7
5,391,938	+				+0.1
5,391,938	+				+0.0
5,391,938	+				-0.9
5,391,938	+				-0.2
5,391,938	+				+0.3
5,391,938	+				-0.5
5,391,938	+				+0.0
5,391,938	+				-1.2
5,391,939	-				+0.8
5,391,939	-				+0.3
5,391,940	+				+0.6
5,391,940	+				-0.2
5,391,940	+				+0.1
5,391,940	+				-0.0
5,391,940	+				+0.4
5,391,940	+				+0.3
5,391,940	+				-0.3
5,391,940	+				+0.7
5,391,940	+				+0.9
5,391,941	-				-0.0
5,391,941	-				-0.5
5,391,941	-				-0.4
5,391,941	-				-0.0
5,391,941	-				+0.8
5,391,941	-				+0.6
5,391,941	-				+1.1
5,391,941	-				-0.1
5,391,941	-				-1.5
5,392,126	-				-0.7
5,392,126	-				+0.0
5,392,274	+				-0.9
5,392,274	+				-0.2
5,392,275	-				-0.0
5,392,275	-				+0.1
5,392,275	-				+0.0
5,392,385	+				+0.2
5,392,386	-				-0.2
5,392,388	-				+0.1
5,392,388	-				+0.3
5,392,496	+				-1.5
5,392,496	+				-1.8
5,392,497	-				-0.9
5,392,497	-				+0.5
5,392,497	-				-0.3
5,392,497	-				-0.6
5,392,523	-				-1.1
5,392,523	-				-0.7
5,392,523	-				-0.1
5,392,523	-				-0.6
5,392,523	-				+0.0
5,392,524	+				-1.0
5,392,524	+				+1.1
5,392,524	+				-0.0
5,392,524	+				+0.5
5,392,524	+				-0.1
5,392,524	+				+1.2
5,392,524	+				+0.6
5,392,524	+				+1.5
5,392,524	+				-1.8
5,392,524	+				+0.3
5,392,524	+				+1.1
5,392,524	+				-1.2
5,392,524	+				+0.2
5,392,524	+				-1.6
5,392,524	+				+0.5
5,392,524	+				+0.2
5,392,524	+				+0.9
5,392,524	+				-0.5
5,392,524	+				-0.2
5,392,524	+				-0.2
5,392,524	+				+0.2
5,392,525	-				-1.3
5,392,525	-				+0.9
5,392,525	-				+0.9
5,392,525	-				+0.6
5,392,525	-				+0.0
5,392,525	-				-0.6
5,392,525	-				+0.9
5,392,525	-				-0.5
5,392,525	-				+0.2
5,392,525	-				-0.9
5,392,525	-				-0.6
5,392,525	-				+0.7
5,392,525	-				-0.4
5,392,525	-				+0.4
5,392,534	-				-1.0
5,392,534	-				-0.6
5,392,534	-				-0.0
5,392,583	+				+0.5
5,392,583	+				+0.4
5,392,584	-				+0.5
5,392,614	-				+0.1
5,392,614	-				-0.5
5,392,614	-				+0.5
5,392,614	-				-0.3
5,392,614	-				-0.7
5,392,616	-				-0.5
5,392,616	-				+0.5
5,392,616	-				+0.0
5,392,636	+		Pf6N2E2_4663	0.12	+1.4
5,392,636	+		Pf6N2E2_4663	0.12	+0.5
5,392,636	+		Pf6N2E2_4663	0.12	+0.2
5,392,636	+		Pf6N2E2_4663	0.12	+0.8
5,392,636	+		Pf6N2E2_4663	0.12	+0.2
5,392,636	+		Pf6N2E2_4663	0.12	+0.9
5,392,636	+		Pf6N2E2_4663	0.12	-0.1
5,392,636	+		Pf6N2E2_4663	0.12	-0.1
5,392,637	-		Pf6N2E2_4663	0.12	+0.2
5,392,637	-		Pf6N2E2_4663	0.12	+0.9
5,392,637	-		Pf6N2E2_4663	0.12	+0.5
5,392,637	-		Pf6N2E2_4663	0.12	+0.1
5,392,637	-		Pf6N2E2_4663	0.12	-0.1
5,392,654	+		Pf6N2E2_4663	0.14	+0.0
5,392,654	+		Pf6N2E2_4663	0.14	+0.7
5,392,654	+		Pf6N2E2_4663	0.14	+0.2
5,392,654	+		Pf6N2E2_4663	0.14	-0.2
5,392,655	-		Pf6N2E2_4663	0.15	+0.3
5,392,655	-		Pf6N2E2_4663	0.15	-0.1
5,392,655	-		Pf6N2E2_4663	0.15	+0.4
5,392,655	-		Pf6N2E2_4663	0.15	+0.1
5,392,676	+		Pf6N2E2_4663	0.18	+0.2
5,392,676	+		Pf6N2E2_4663	0.18	-0.1
5,392,676	+		Pf6N2E2_4663	0.18	-0.1
5,392,676	+		Pf6N2E2_4663	0.18	+0.1
5,392,677	-		Pf6N2E2_4663	0.18	+0.2
5,392,693	+		Pf6N2E2_4663	0.20	+0.4
5,392,693	+		Pf6N2E2_4663	0.20	+0.7
5,392,693	+		Pf6N2E2_4663	0.20	+0.2
5,392,694	-		Pf6N2E2_4663	0.20	+0.0
5,392,694	-		Pf6N2E2_4663	0.20	-0.1
5,392,694	-		Pf6N2E2_4663	0.20	+0.9
5,392,694	-		Pf6N2E2_4663	0.20	+1.4
5,392,700	+		Pf6N2E2_4663	0.21	-0.0
5,392,700	+		Pf6N2E2_4663	0.21	+1.3
5,392,701	-		Pf6N2E2_4663	0.22	+0.6
5,392,701	-		Pf6N2E2_4663	0.22	+0.9
5,392,701	-		Pf6N2E2_4663	0.22	+0.5
5,392,701	-		Pf6N2E2_4663	0.22	+0.7
5,392,715	+		Pf6N2E2_4663	0.24	-0.2
5,392,715	+		Pf6N2E2_4663	0.24	+0.4
5,392,716	-		Pf6N2E2_4663	0.24	-1.3
5,392,716	-		Pf6N2E2_4663	0.24	-0.1
5,392,716	-		Pf6N2E2_4663	0.24	-1.5
5,392,716	-		Pf6N2E2_4663	0.24	+0.9
5,392,718	+		Pf6N2E2_4663	0.24	-0.8
5,392,794	-		Pf6N2E2_4663	0.35	+1.0
5,392,794	-		Pf6N2E2_4663	0.35	-0.1
5,392,796	+		Pf6N2E2_4663	0.36	-0.1
5,392,797	-		Pf6N2E2_4663	0.36	+0.4
5,392,797	-		Pf6N2E2_4663	0.36	-0.2
5,392,870	+		Pf6N2E2_4663	0.47	+0.7
5,392,870	+		Pf6N2E2_4663	0.47	-1.5
5,392,870	+		Pf6N2E2_4663	0.47	+1.7
5,392,870	+		Pf6N2E2_4663	0.47	-0.6
5,392,871	-		Pf6N2E2_4663	0.47	+0.5
5,392,871	-		Pf6N2E2_4663	0.47	-0.1
5,392,871	-		Pf6N2E2_4663	0.47	+0.9
5,392,871	-		Pf6N2E2_4663	0.47	-0.0
5,392,871	-		Pf6N2E2_4663	0.47	+0.4
5,392,877	-		Pf6N2E2_4663	0.48	-0.2
5,392,982	+		Pf6N2E2_4663	0.64	+1.0
5,392,982	+		Pf6N2E2_4663	0.64	-2.8
5,392,982	+		Pf6N2E2_4663	0.64	+1.3
5,392,999	+		Pf6N2E2_4663	0.66	+0.4
5,393,027	+		Pf6N2E2_4663	0.70	-0.6
5,393,029	+		Pf6N2E2_4663	0.71	-0.1
5,393,030	-		Pf6N2E2_4663	0.71	-1.6
5,393,030	-		Pf6N2E2_4663	0.71	+1.3
5,393,030	-		Pf6N2E2_4663	0.71	-0.0
5,393,030	-		Pf6N2E2_4663	0.71	-0.0
5,393,030	-		Pf6N2E2_4663	0.71	+0.7
5,393,057	-		Pf6N2E2_4663	0.75	+0.2
5,393,101	+		Pf6N2E2_4663	0.81	+0.7
5,393,101	+		Pf6N2E2_4663	0.81	+0.5
5,393,101	+		Pf6N2E2_4663	0.81	-0.2
5,393,101	+		Pf6N2E2_4663	0.81	+1.0
5,393,101	+		Pf6N2E2_4663	0.81	+0.8
5,393,101	+		Pf6N2E2_4663	0.81	-0.4
5,393,101	+		Pf6N2E2_4663	0.81	+0.0
5,393,102	-		Pf6N2E2_4663	0.81	+0.2
5,393,102	-		Pf6N2E2_4663	0.81	-0.6
5,393,102	-		Pf6N2E2_4663	0.81	+0.1
5,393,102	-		Pf6N2E2_4663	0.81	+0.6
5,393,102	-		Pf6N2E2_4663	0.81	-0.5
5,393,102	-		Pf6N2E2_4663	0.81	+0.2
5,393,102	-		Pf6N2E2_4663	0.81	+0.6
5,393,128	+		Pf6N2E2_4663	0.85	-0.0
5,393,128	+		Pf6N2E2_4663	0.85	+0.7
5,393,128	+		Pf6N2E2_4663	0.85	+1.1
5,393,128	+		Pf6N2E2_4663	0.85	+1.2
5,393,128	+		Pf6N2E2_4663	0.85	+1.4
5,393,129	-		Pf6N2E2_4663	0.86	+1.9
5,393,129	-		Pf6N2E2_4663	0.86	-0.0
5,393,129	-		Pf6N2E2_4663	0.86	+0.8
5,393,132	+		Pf6N2E2_4663	0.86	+1.0
5,393,132	+		Pf6N2E2_4663	0.86	+1.0
5,393,132	+		Pf6N2E2_4663	0.86	+0.1
5,393,132	+		Pf6N2E2_4663	0.86	-0.6
5,393,132	+		Pf6N2E2_4663	0.86	+0.3
5,393,132	+		Pf6N2E2_4663	0.86	+0.5
5,393,132	+		Pf6N2E2_4663	0.86	+0.1
5,393,132	+		Pf6N2E2_4663	0.86	-0.3
5,393,132	+		Pf6N2E2_4663	0.86	-1.3
5,393,132	+		Pf6N2E2_4663	0.86	-0.4
5,393,132	+		Pf6N2E2_4663	0.86	-0.1
5,393,132	+		Pf6N2E2_4663	0.86	-0.1
5,393,132	+		Pf6N2E2_4663	0.86	+1.2
5,393,132	+		Pf6N2E2_4663	0.86	+0.7
5,393,133	-		Pf6N2E2_4663	0.86	-0.0
5,393,133	-		Pf6N2E2_4663	0.86	-0.4
5,393,133	-		Pf6N2E2_4663	0.86	+0.8
5,393,133	-		Pf6N2E2_4663	0.86	+0.1
5,393,133	-		Pf6N2E2_4663	0.86	+0.3
5,393,133	-		Pf6N2E2_4663	0.86	+0.1
5,393,133	-		Pf6N2E2_4663	0.86	+0.3
5,393,246	+				+0.6
5,393,246	+				-0.8
5,393,246	+				-0.2
5,393,246	+				-0.4
5,393,246	+				-1.9
5,393,246	+				-0.4
5,393,246	+				-0.3
5,393,246	+				+1.1
5,393,247	-				-0.4
5,393,247	-				-1.3
5,393,247	-				-0.1
5,393,247	-				+0.1
5,393,247	-				+2.0
5,393,247	-				-0.2
5,393,258	+				+0.6
5,393,258	+				+0.7
5,393,259	-				+0.6
5,393,278	+				+0.1
5,393,279	-				+0.0
5,393,279	-				-0.9
5,393,279	-				+1.0
5,393,613	+				+0.3
5,393,614	-				-0.2
5,393,634	+		Pf6N2E2_4664	0.12	+0.4
5,393,634	+		Pf6N2E2_4664	0.12	+0.5
5,393,634	+		Pf6N2E2_4664	0.12	-0.9
5,393,634	+		Pf6N2E2_4664	0.12	+0.9
5,393,634	+		Pf6N2E2_4664	0.12	-0.9
5,393,634	+		Pf6N2E2_4664	0.12	+0.5
5,393,634	+		Pf6N2E2_4664	0.12	+0.1
5,393,634	+		Pf6N2E2_4664	0.12	-0.7
5,393,634	+		Pf6N2E2_4664	0.12	+0.0
5,393,635	-		Pf6N2E2_4664	0.12	+1.2
5,393,635	-		Pf6N2E2_4664	0.12	-0.6
5,393,635	-		Pf6N2E2_4664	0.12	-0.4
5,393,635	-		Pf6N2E2_4664	0.12	-0.1
5,393,674	+		Pf6N2E2_4664	0.18	+0.4
5,393,675	-		Pf6N2E2_4664	0.18	+0.1
5,393,700	+		Pf6N2E2_4664	0.22	+0.1
5,393,700	+		Pf6N2E2_4664	0.22	-1.1
5,393,751	+		Pf6N2E2_4664	0.29	+0.4
5,393,751	+		Pf6N2E2_4664	0.29	+1.2
5,393,751	+		Pf6N2E2_4664	0.29	-0.4
5,393,752	-		Pf6N2E2_4664	0.29	+0.0
5,393,752	-		Pf6N2E2_4664	0.29	+0.5
5,393,752	-		Pf6N2E2_4664	0.29	-0.7
5,393,791	+		Pf6N2E2_4664	0.35	-0.4
5,393,791	+		Pf6N2E2_4664	0.35	+1.3
5,393,792	-		Pf6N2E2_4664	0.35	+0.2
5,393,792	-		Pf6N2E2_4664	0.35	-0.8
5,393,859	+		Pf6N2E2_4664	0.45	+0.3
5,393,860	-		Pf6N2E2_4664	0.46	+0.2
5,393,860	-		Pf6N2E2_4664	0.46	-0.6
5,393,860	-		Pf6N2E2_4664	0.46	+1.0
5,393,860	-		Pf6N2E2_4664	0.46	-0.7
5,393,860	-		Pf6N2E2_4664	0.46	+0.7
5,393,869	-		Pf6N2E2_4664	0.47	+0.6
5,393,875	-		Pf6N2E2_4664	0.48	+1.0
5,393,949	-		Pf6N2E2_4664	0.59	-0.2
5,394,028	-		Pf6N2E2_4664	0.71	-0.1
5,394,055	-		Pf6N2E2_4664	0.75	+0.7
5,394,126	+		Pf6N2E2_4664	0.85	-0.0
5,394,126	+		Pf6N2E2_4664	0.85	+0.4
5,394,126	+		Pf6N2E2_4664	0.85	+0.7
5,394,126	+		Pf6N2E2_4664	0.85	+0.3
5,394,126	+		Pf6N2E2_4664	0.85	+0.0
5,394,126	+		Pf6N2E2_4664	0.85	+1.1
5,394,127	-		Pf6N2E2_4664	0.86	-0.7
5,394,127	-		Pf6N2E2_4664	0.86	+0.0
5,394,127	-		Pf6N2E2_4664	0.86	+0.7
5,394,127	-		Pf6N2E2_4664	0.86	-0.0
5,394,127	-		Pf6N2E2_4664	0.86	+0.0