Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3469

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
4,050,195	+		Pf6N2E2_3468	0.12	+0.3
4,050,195	+		Pf6N2E2_3468	0.12	-1.4
4,050,195	+		Pf6N2E2_3468	0.12	-2.0
4,050,195	+		Pf6N2E2_3468	0.12	-0.2
4,050,196	-		Pf6N2E2_3468	0.13	-3.8
4,050,196	-		Pf6N2E2_3468	0.13	-1.8
4,050,196	-		Pf6N2E2_3468	0.13	+0.2
4,050,196	-		Pf6N2E2_3468	0.13	-0.3
4,050,196	-		Pf6N2E2_3468	0.13	-1.0
4,050,196	-		Pf6N2E2_3468	0.13	-1.7
4,050,297	+		Pf6N2E2_3468	0.22	-1.1
4,050,297	+		Pf6N2E2_3468	0.22	-3.7
4,050,519	+		Pf6N2E2_3468	0.42	-2.2
4,050,519	+		Pf6N2E2_3468	0.42	+0.2
4,050,520	-		Pf6N2E2_3468	0.42	-1.6
4,050,520	-		Pf6N2E2_3468	0.42	-0.0
4,050,520	-		Pf6N2E2_3468	0.42	-2.5
4,050,520	-		Pf6N2E2_3468	0.42	-0.1
4,050,520	-		Pf6N2E2_3468	0.42	-1.8
4,050,661	+		Pf6N2E2_3468	0.55	-2.1
4,050,663	+		Pf6N2E2_3468	0.55	-0.4
4,050,663	+		Pf6N2E2_3468	0.55	-1.8
4,050,663	+		Pf6N2E2_3468	0.55	-0.1
4,050,663	+		Pf6N2E2_3468	0.55	-0.0
4,050,663	+		Pf6N2E2_3468	0.55	-1.8
4,050,663	+		Pf6N2E2_3468	0.55	-0.4
4,050,664	-		Pf6N2E2_3468	0.55	-0.5
4,050,664	-		Pf6N2E2_3468	0.55	-0.5
4,050,664	-		Pf6N2E2_3468	0.55	-1.3
4,050,664	-		Pf6N2E2_3468	0.55	+0.1
4,050,664	-		Pf6N2E2_3468	0.55	-1.5
4,050,664	-		Pf6N2E2_3468	0.55	-1.5
4,050,911	+		Pf6N2E2_3468	0.77	-1.2
4,050,911	+		Pf6N2E2_3468	0.77	-0.5
4,050,912	-		Pf6N2E2_3468	0.77	-0.5
4,050,981	+		Pf6N2E2_3468	0.83	-1.3
4,050,981	+		Pf6N2E2_3468	0.83	-1.2
4,050,981	+		Pf6N2E2_3468	0.83	-1.7
4,050,981	+		Pf6N2E2_3468	0.83	-2.2
4,050,981	+		Pf6N2E2_3468	0.83	-1.3
4,050,981	+		Pf6N2E2_3468	0.83	-0.9
4,050,981	+		Pf6N2E2_3468	0.83	+0.3
4,050,981	+		Pf6N2E2_3468	0.83	-1.4
4,050,981	+		Pf6N2E2_3468	0.83	-3.1
4,050,981	+		Pf6N2E2_3468	0.83	-1.7
4,050,981	+		Pf6N2E2_3468	0.83	-1.7
4,050,982	-		Pf6N2E2_3468	0.84	-1.0
4,050,982	-		Pf6N2E2_3468	0.84	-0.7
4,050,982	-		Pf6N2E2_3468	0.84	-1.4
4,050,982	-		Pf6N2E2_3468	0.84	-1.5
4,050,982	-		Pf6N2E2_3468	0.84	-3.6
4,050,982	-		Pf6N2E2_3468	0.84	-0.1
4,050,982	-		Pf6N2E2_3468	0.84	-1.3
4,051,186	+				-0.8
4,051,187	-				+0.3
4,051,214	-				-0.7
4,051,221	+				-1.3
4,051,222	-				-1.4
4,051,416	+		Pf6N2E2_3469	0.27	-1.8
4,051,416	+		Pf6N2E2_3469	0.27	-1.6
4,051,416	+		Pf6N2E2_3469	0.27	-2.1
4,051,417	-		Pf6N2E2_3469	0.27	-0.6
4,051,417	-		Pf6N2E2_3469	0.27	-0.8
4,051,541	+		Pf6N2E2_3469	0.41	-1.0
4,051,541	+		Pf6N2E2_3469	0.41	-2.0
4,051,542	-		Pf6N2E2_3469	0.41	-1.9
4,051,542	-		Pf6N2E2_3469	0.41	-0.6
4,051,545	+		Pf6N2E2_3469	0.41	-2.0
4,051,545	+		Pf6N2E2_3469	0.41	-1.8
4,051,545	+		Pf6N2E2_3469	0.41	-1.3
4,051,545	+		Pf6N2E2_3469	0.41	-1.1
4,051,545	+		Pf6N2E2_3469	0.41	-1.7
4,051,545	+		Pf6N2E2_3469	0.41	-2.0
4,051,545	+		Pf6N2E2_3469	0.41	+0.3
4,051,545	+		Pf6N2E2_3469	0.41	-1.5
4,051,545	+		Pf6N2E2_3469	0.41	-1.3
4,051,545	+		Pf6N2E2_3469	0.41	-1.4
4,051,545	+		Pf6N2E2_3469	0.41	-1.6
4,051,545	+		Pf6N2E2_3469	0.41	-0.3
4,051,546	-		Pf6N2E2_3469	0.41	-4.2
4,051,546	-		Pf6N2E2_3469	0.41	-2.1
4,051,546	-		Pf6N2E2_3469	0.41	-0.7
4,051,546	-		Pf6N2E2_3469	0.41	-1.0
4,051,546	-		Pf6N2E2_3469	0.41	-1.2
4,051,546	-		Pf6N2E2_3469	0.41	-2.5
4,051,546	-		Pf6N2E2_3469	0.41	-0.5
4,051,598	+		Pf6N2E2_3469	0.47	-1.1
4,051,598	+		Pf6N2E2_3469	0.47	-1.0
4,051,599	-		Pf6N2E2_3469	0.47	-2.3
4,051,599	-		Pf6N2E2_3469	0.47	-0.2
4,051,778	+		Pf6N2E2_3469	0.66	-0.8
4,051,778	+		Pf6N2E2_3469	0.66	-1.4
4,051,778	+		Pf6N2E2_3469	0.66	-1.7
4,051,793	+		Pf6N2E2_3469	0.68	-0.3
4,051,793	+		Pf6N2E2_3469	0.68	-0.5
4,051,794	-		Pf6N2E2_3469	0.68	-1.5
4,051,794	-		Pf6N2E2_3469	0.68	-0.7
4,051,898	+		Pf6N2E2_3469	0.79	+1.3
4,051,898	+		Pf6N2E2_3469	0.79	-1.8
4,052,045	+				-0.3
4,052,092	+				+0.6
4,052,092	+				-0.5
4,052,092	+				-0.3
4,052,092	+				+0.6
4,052,092	+				+0.4
4,052,093	-				+0.3
4,052,093	-				-1.2
4,052,093	-				+0.2
4,052,093	-				+0.9
4,052,143	+				+0.5
4,052,143	+				-0.3
4,052,143	+				+0.3
4,052,143	+				-0.1
4,052,144	-				+0.9
4,052,144	-				-1.1
4,052,144	-				+0.6
4,052,278	+		Pf6N2E2_3470	0.31	-0.6
4,052,279	-		Pf6N2E2_3470	0.31	-0.3
4,052,279	-		Pf6N2E2_3470	0.31	-0.7
4,052,279	-		Pf6N2E2_3470	0.31	-1.2
4,052,320	+		Pf6N2E2_3470	0.41	+0.3
4,052,320	+		Pf6N2E2_3470	0.41	-0.4
4,052,321	-		Pf6N2E2_3470	0.41	+0.2
4,052,329	+		Pf6N2E2_3470	0.43	+0.4
4,052,329	+		Pf6N2E2_3470	0.43	-0.3
4,052,448	+		Pf6N2E2_3470	0.70	+0.7
4,052,449	-		Pf6N2E2_3470	0.70	-1.2
4,052,449	-		Pf6N2E2_3470	0.70	-0.9
4,052,560	+				-0.6
4,052,579	+				+0.3
4,052,579	+				+1.0
4,052,579	+				-0.2
4,052,579	+				+0.2
4,052,580	-				-0.6
4,052,580	-				-0.0
4,052,580	-				+1.3
4,052,595	+				-0.5
4,052,595	+				-0.8
4,052,596	-				-1.2
4,052,596	-				+1.2
4,052,596	-				-0.3
4,052,678	+				+1.1
4,052,719	+		Pf6N2E2_3471	0.16	+0.6
4,052,720	-		Pf6N2E2_3471	0.17	+0.1
4,052,803	+		Pf6N2E2_3471	0.40	+0.2
4,052,803	+		Pf6N2E2_3471	0.40	+0.0
4,052,803	+		Pf6N2E2_3471	0.40	-0.4
4,052,803	+		Pf6N2E2_3471	0.40	+1.2
4,052,804	-		Pf6N2E2_3471	0.40	+0.0
4,052,804	-		Pf6N2E2_3471	0.40	-0.1
4,052,804	-		Pf6N2E2_3471	0.40	-0.3
4,052,804	-		Pf6N2E2_3471	0.40	+0.7
4,052,804	-		Pf6N2E2_3471	0.40	+0.5
4,052,940	+		Pf6N2E2_3471	0.79	+0.8
4,053,003	-				-0.0
4,053,003	-				-0.2